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DNA Fingerprinting of Mycobacterium leprae Strains Using Variable Number Tandem Repeat VNTR - Fragment Length Analysis FLA
Published on: July 15, 2011
Polymorphisms in mitochondrial ribosomal protein S5 (MRPS5) are associated with leprosy risk in Chinese
Yan Xing1,2, Jun He3, Yan Wen1,2
1Beijing Tropical Medicine Research Institute, Beijing Friendship Hospital, Capital Medical University, Beijing, China.
Abstract:
Leprosy is an infectious disease caused by Mycobacterium leprae (M. leprae), with about 210,000 new cases per year worldwide. Although numerous risk loci have been uncovered by genome-wide association studies, the effects of common genetic variants are relatively modest. To identify possible new genetic locus involved in susceptibility to leprosy, whole exome sequencing was performed for 28 subjects including 14 patients and 12 unaffected members from 8 leprosy-affected families as well as another case and an unrelated control, and then the follow-up SNP genotyping of the candidate variants was studied in case-control sample sets. A rare missense variant in mitochondrial ribosomal protein S5 (MRPS5), rs200730619 (c. 95108402T>C [p. Tyr137Cys]) was identified and validated in 369 cases and 270 controls of Chinese descent (Padjusted = 0.006, odds ratio [OR] = 2.74) as a contributing factor to leprosy risk. Moreover, the mRNA level of MRPS5 was downregulated in M. leprae sonicate-stimulated peripheral blood mononuclear cells. Our results indicated that MRPS5 may be involved in leprosy pathogenesis. Further studies are needed to determine if defective MRPS5 could lead to impairment of energy metabolism of host immune cells, which could further cause defect in clearing M. leprae and increase susceptibility to infection.
Insights
A rare genetic variant in mitochondrial ribosomal protein S5 (MRPS5) increases leprosy risk. Lower MRPS5 gene expression in immune cells suggests its role in Mycobacterium leprae infection susceptibility.
Area of Science:
- Genetics
- Infectious Diseases
- Immunology
Background:
- Leprosy, caused by Mycobacterium leprae (M. leprae), affects approximately 210,000 individuals annually worldwide.
- Genome-wide association studies have identified modest genetic risk loci, necessitating further investigation into novel genetic factors.
- Understanding genetic susceptibility is crucial for developing targeted prevention and treatment strategies for leprosy.
Purpose of the Study:
- To identify novel genetic loci associated with susceptibility to leprosy.
- To investigate the role of identified genetic variants in the pathogenesis of leprosy.
- To explore the functional implications of genetic variations on immune response to M. leprae.
Main Methods:
- Whole exome sequencing was performed on 28 subjects from leprosy-affected families and controls.
- Candidate variants were validated using SNP genotyping in a case-control cohort of 369 leprosy patients and 270 controls of Chinese descent.
- Messenger RNA (mRNA) levels of the candidate gene were assessed in peripheral blood mononuclear cells stimulated with M. leprae sonicate.
Main Results:
- A rare missense variant (rs200730619) in mitochondrial ribosomal protein S5 (MRPS5) was identified as a significant risk factor for leprosy (Padjusted = 0.006, OR = 2.74).
- The mRNA expression level of MRPS5 was found to be downregulated in peripheral blood mononuclear cells stimulated with M. leprae sonicate.
- The identified MRPS5 variant was validated in a substantial case-control cohort, confirming its association with leprosy risk.
Conclusions:
- The study implicates MRPS5 as a potential genetic factor contributing to leprosy pathogenesis.
- Downregulation of MRPS5 in immune cells suggests a role in the host's response to M. leprae infection.
- Further research is warranted to elucidate the functional impact of MRPS5 defects on immune cell energy metabolism and M. leprae clearance.
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