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C-Norm: a neural approach to few-shot entity normalization.

Arnaud Ferré1, Louise Deléger2, Robert Bossy1

  • 1Université Paris-Saclay, INRAE, MaIAGE, Jouy-en-Josas, France.

BMC Bioinformatics
|December 29, 2020
PubMed
Summary

C-Norm, a novel neural approach, enhances entity normalization in specialized domains by combining supervision methods and knowledge integration. This method excels in challenging multi-class, few-shot learning scenarios, outperforming existing techniques.

Keywords:
Entity normalizationFew-shot learningNeural networksOntologyVector space model

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Area of Science:

  • Biomedical informatics
  • Computational linguistics
  • Machine learning

Background:

  • Entity normalization is a critical information extraction task, especially in biomedical and life sciences.
  • Machine learning approaches struggle with the high multi-class and few-shot nature of entity normalization in specialized domains.
  • Existing methods often require manually-designed, domain-specific rules.

Purpose of the Study:

  • To introduce C-Norm, a novel neural approach for entity normalization.
  • To address the challenges of multi-class and few-shot learning in specialized domains.
  • To improve the performance of entity normalization without relying on domain-specific rules.

Main Methods:

  • C-Norm synergistically combines standard and weak supervision.
  • Integrates ontological knowledge and distributional semantics.
  • Employs a neural network architecture.

Main Results:

  • C-Norm significantly outperforms all evaluated methods on the Bacteria Biotope datasets (BioNLP Open Shared Tasks 2019).
  • Achieved superior performance without incorporating any manually-designed domain-specific rules.
  • Demonstrated effectiveness in highly multi-class and few-shot learning environments.

Conclusions:

  • Shallow neural network methods can effectively handle complex entity normalization tasks.
  • C-Norm provides a robust solution for specialized domains with limited labeled data.
  • The proposed approach offers a promising direction for advancing information extraction in challenging fields.