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An integrated pan-cancer analysis of TFAP4 aberrations and the potential clinical implications for cancer immunity
Jian-Nan Liu1, Xiang-Shuo Kong1, Ping Sun1
1Department of Oncology, Yantai Yuhuangding Hospital, Yantai, China.
Abstract:
Studies have shown that transcription factor activating enhancer binding protein 4 (TFAP4) plays a vital role in multiple types of cancer; however, the TFAP4 expression profile is still unknown, as is its value within the human pan-cancer analysis. The present study comprehensively analysed TFAP4 expression patterns from 33 types of malignancies, along with the significance of TFAP4 for prognosis prediction and cancer immunity. TFAP4 displayed inconsistent levels of gene expression across the diverse cancer cell lines, and displayed abnormal expression within most malignant tumours, which closely corresponded to overall survival. More importantly, the TFAP4 level was also significantly related to the degree of tumour infiltration. TFAP4 was correlated using gene markers in tumour-infiltrating immune cells and immune scores. TFAP4 expression was correlated with tumour mutation burden and microsatellite instability in different cancer types, and enrichment analyses identified TFAP4-associated terms and pathways. The present study comprehensively analysed the expression of TFAP4 across 33 distinct types of cancers, which revealed that TFAP4 may possibly play a vital role during cancer formation and development. TFAP4 is related to differing degrees of immune infiltration within cancers, which suggests the potential of TFAP4 as an immunotherapy target in cancers. Our study demonstrated that TFAP4 plays an important role in tumorigenesis as a prognostic biomarker, which highlights the possibility of developing new targeted treatments.
Insights
Transcription factor activating enhancer binding protein 4 (TFAP4) is abnormally expressed in most cancers and impacts survival. TFAP4 also correlates with immune infiltration, suggesting its potential as an immunotherapy target.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Genomics
Background:
- Transcription factor activating enhancer binding protein 4 (TFAP4) is implicated in various cancers.
- Its expression profile and pan-cancer significance remain largely uncharacterized.
Purpose of the Study:
- To comprehensively analyze TFAP4 expression across 33 cancer types.
- To evaluate TFAP4's role in prognosis, cancer immunity, and tumorigenesis.
Main Methods:
- Pan-cancer analysis of TFAP4 expression data.
- Correlation analysis with survival, tumor-infiltrating immune cells, immune scores, tumor mutation burden, and microsatellite instability.
- Enrichment analyses for associated pathways.
Main Results:
- TFAP4 exhibits variable expression across cancer cell lines and abnormal expression in most tumors, correlating with overall survival.
- TFAP4 levels are significantly associated with tumor infiltration, immune cell markers, and immune scores.
- TFAP4 expression correlates with tumor mutation burden and microsatellite instability, with identified associated pathways.
Conclusions:
- TFAP4 plays a critical role in tumorigenesis and cancer development.
- TFAP4 is linked to varying degrees of immune infiltration, indicating potential as an immunotherapy target.
- TFAP4 serves as a prognostic biomarker, highlighting avenues for novel targeted therapies.
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