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Updated: Nov 23, 2025

Engineering Antiviral Agents via Surface Plasmon Resonance
Published on: June 14, 2022
Structural insights of key enzymes into therapeutic intervention against SARS-CoV-2
Munazza Shahid1, Syed Shahzad-Ul-Hussan1
1Department of Biology, SBA School of Science and Engineering, Lahore University of Management Sciences, Lahore 54792, Pakistan.
Abstract:
COVID-19 pandemic, caused by SARS-CoV-2, has drastically affected human health all over the world. After the emergence of the pandemic the major focus of efforts to attenuate the infection has been on repurposing the already approved drugs to treat COVID-19 adopting a fast-track strategy. However, to date a specific regimen to treat COVID-19 is not available. Over the last few months a substantial amount of data about the structures of various key proteins and their recognition partners involved in the SARS-CoV-2 pathogenesis has emerged. These studies have not only provided the molecular level descriptions ofthe viral pathogenesis but also laid the foundation for rational drug design and discovery. In this review, we have recapitulated the structural details of four key viral enzymes, RNA-dependent RNA polymerase, 3-chymotrypsin like protease, papain-like protease and helicase, and two host factors including angiotensin-converting enzyme 2 and transmembrane serine protease involved in the SARS-CoV-2 pathogenesis, and described the potential hotspots present on these structures which could be explored for therapeutic intervention. We have also discussed the significance of endoplasmic reticulum α-glucosidases as potential targets for anti-SARS-CoV-2 drug discovery.
Insights
This review details key SARS-CoV-2 proteins and host factors, identifying potential therapeutic targets for COVID-19 drug discovery. Structural insights into viral enzymes and host interactions guide rational drug design against the pandemic virus.
Area of Science:
- Virology and Drug Discovery
- Structural Biology
- Infectious Diseases
Background:
- The COVID-19 pandemic, caused by SARS-CoV-2, necessitates rapid therapeutic strategies.
- Drug repurposing has been a primary approach, but specific treatments remain elusive.
- Emerging structural data on SARS-CoV-2 proteins and host factors offers new avenues for drug development.
Purpose of the Study:
- To review the structural details of key SARS-CoV-2 viral enzymes and host factors.
- To identify potential therapeutic intervention sites (hotspots) on these structures.
- To discuss the significance of endoplasmic reticulum α-glucosidases as drug targets.
Main Methods:
- Recapitulation of structural data for SARS-CoV-2 RNA-dependent RNA polymerase, 3-chymotrypsin-like protease, papain-like protease, and helicase.
- Analysis of structural information for host factors angiotensin-converting enzyme 2 and transmembrane serine protease.
- Review of literature on endoplasmic reticulum α-glucosidases in the context of SARS-CoV-2 infection.
Main Results:
- Detailed structural descriptions of critical viral enzymes and host interaction proteins.
- Identification of potential 'hotspots' on these structures for targeted drug design.
- Highlighting endoplasmic reticulum α-glucosidases as promising targets for novel antiviral therapies.
Conclusions:
- Structural biology provides a foundation for rational drug design against SARS-CoV-2.
- Targeting specific viral enzymes and host factors, including ER α-glucosidases, offers therapeutic potential.
- Further exploration of identified hotspots could lead to effective COVID-19 treatments.
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