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Updated: Nov 22, 2025

Author Spotlight: Epigenetic Modifications and Metabolic Rewiring as Targets for Cancer Therapy
Published on: October 18, 2024
Epigenetic Regulatory Enzymes: mutation Prevalence and Coexistence in Cancers
Amit Sharma1,2, Hongde Liu3, Martina C Herwig-Carl4
1Department of Integrated Oncology, CIO Bonn, University Hospital Bonn, Bonn, Germany.
Abstract:
Epigenetic regulation is an important layer of transcriptional control with the particularity to affect the broad spectrum of genome. Over the years, largely due to the substantial number of recurrent mutations, there have been hundreds of novel driver genes characterized in various cancers. Additionally, the relative contribution of two dysregulated epigenomic entities (DNA methylation and histone modifications) that gradually drive the cancer phenotype remains in the research focus. However, a complex scenario arises when the disease phenotype does not harbor any relevant mutation or an abnormal transcription level. Although the cancer landscape involves the contribution of multiple genetic and non-genetic factors, herein, we discuss specifically the mutation spectrum of epigenetically-related enzymes in cancer. In addition, we address the coexistence of these two epigenetic entities in malignant human diseases, especially cancer. We suggest that the study of epigenetically-related somatic mutations in the early cellular differentiation stage of embryonic development might help to understand their later-staged footprints in the cancer genome. Furthermore, understanding the co-occurrence and/or inverse association of different disease types and redefining the general definition of "healthy" controls could provide insights into the genome reorganization.
Insights
Epigenetic regulation, involving DNA methylation and histone modifications, plays a key role in cancer development. Studying epigenetically-related mutations early in development may illuminate their role in cancer genomes.
Area of Science:
- Genetics and Molecular Biology
- Cancer Research
- Epigenetics
Background:
- Epigenetic regulation, including DNA methylation and histone modifications, is crucial for transcriptional control across the genome.
- Numerous cancer driver genes have been identified, yet some disease phenotypes lack relevant mutations or abnormal transcription.
- The interplay between DNA methylation and histone modifications in driving cancer progression is an active area of research.
Purpose of the Study:
- To discuss the mutation spectrum of epigenetically-related enzymes in cancer.
- To address the coexistence of DNA methylation and histone modifications in malignant diseases.
- To explore the potential of studying early developmental epigenetics for understanding cancer genomes.
Main Methods:
- Review and discussion of existing literature on epigenetically-related mutations in cancer.
- Analysis of the co-occurrence and inverse associations of epigenetic modifications in human diseases.
- Consideration of early embryonic development stages for studying somatic mutations.
Main Results:
- Epigenetically-related enzymes are frequently mutated in various cancers.
- Both DNA methylation and histone modifications are dysregulated and contribute to cancer phenotypes, sometimes independently of mutations.
- The study of early epigenetic events may provide insights into later cancer development.
Conclusions:
- Epigenetic alterations, particularly mutations in related enzymes, are significant contributors to cancer.
- Understanding the combined roles and associations of DNA methylation and histone modifications is vital for cancer research.
- Investigating epigenetic mutations during early development and refining control group definitions could advance our understanding of genome reorganization in cancer.
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