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Updated: Nov 22, 2025

Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Novel modulators of p53-signaling encoded by unknown genes of emerging viruses
Dina Alzhanova1,2, Kathleen Corcoran1,2, Aubrey G Bailey1,2
1Department of Microbiology and Immunology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Abstract:
The p53 transcription factor plays a key role both in cancer and in the cell-intrinsic response to infections. The ORFEOME project hypothesized that novel p53-virus interactions reside in hitherto uncharacterized, unknown, or hypothetical open reading frames (orfs) of human viruses. Hence, 172 orfs of unknown function from the emerging viruses SARS-Coronavirus, MERS-Coronavirus, influenza, Ebola, Zika (ZIKV), Chikungunya and Kaposi Sarcoma-associated herpesvirus (KSHV) were de novo synthesized, validated and tested in a functional screen of p53 signaling. This screen revealed novel mechanisms of p53 virus interactions and two viral proteins KSHV orf10 and ZIKV NS2A binding to p53. Originally identified as the target of small DNA tumor viruses, these experiments reinforce the notion that all viruses, including RNA viruses, interfere with p53 functions. These results validate this resource for analogous systems biology approaches to identify functional properties of uncharacterized viral proteins, long non-coding RNAs and micro RNAs.
Insights
Researchers explored unknown viral proteins to find new ways viruses interact with the p53 protein, crucial for cancer and immunity. They identified two viral proteins that bind to p53, showing all viruses interfere with this key cellular defense.
Area of Science:
- Virology
- Molecular Biology
- Cancer Research
Background:
- The p53 transcription factor is vital in cellular responses to DNA damage, cancer development, and viral infections.
- The ORFEOME project aimed to uncover novel p53-virus interactions within uncharacterized viral open reading frames (orfs).
Purpose of the Study:
- To identify and characterize novel interactions between the p53 protein and proteins encoded by unknown viral orfs.
- To investigate the functional significance of these interactions in the context of viral infection and host defense.
Main Methods:
- Synthesized and validated 172 orfs of unknown function from diverse emerging viruses, including SARS-Coronavirus, MERS-Coronavirus, influenza, Ebola, Zika (ZIKV), Chikungunya, and Kaposi Sarcoma-associated herpesvirus (KSHV).
- Performed a functional screen to assess the impact of these viral orfs on p53 signaling pathways.
Main Results:
- Discovered novel mechanisms by which viruses interact with the p53 pathway.
- Identified two specific viral proteins, KSHV orf10 and ZIKV NS2A, that directly bind to the p53 protein.
- Confirmed that viral interference with p53 function extends to both RNA and DNA viruses.
Conclusions:
- These findings expand our understanding of virus-host interactions, particularly concerning the p53 tumor suppressor.
- The study validates the ORFEOME resource for systems biology approaches to discover functions of uncharacterized viral elements like proteins, long non-coding RNAs, and microRNAs.
- Reinforces the conserved strategy of viruses to manipulate the p53 pathway for their replication and survival.
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