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Updated: Nov 21, 2025

Array Comparative Genomic Hybridization Array CGH for Detection of Genomic Copy Number Variants
Published on: February 21, 2015
Large mosaic copy number variations confer autism risk.
Maxwell A Sherman1,2,3, Rachel E Rodin4, Giulio Genovese5,6,7
1Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA, USA. maxas@mit.edu.
Mosaic copy number variants (mCNVs) contribute to autism spectrum disorder (ASD) risk. Larger mCNVs were more frequent in ASD probands and correlated with symptom severity, suggesting a role in ASD etiology.
Area of Science:
- Genetics
- Neurodevelopmental Disorders
- Genomic Instability
Background:
- Germline de novo copy number variants (CNVs) are established genetic causes of autism spectrum disorder (ASD).
- The role of mosaic copy number variants (mCNVs), arising during early development, in ASD etiology remains largely unexplored.
Purpose of the Study:
- To investigate the contribution of mCNVs to the genetic risk of ASD.
- To determine if mCNVs are associated with ASD diagnosis and symptom severity.
Main Methods:
- Analysis of genotype array intensity data from a large cohort of 12,077 ASD probands and 5,500 unaffected siblings.
- Detection and characterization of mCNVs, including their size and cellularity.
- Experimental validation of identified mCNVs in postmortem brain tissue.
Main Results:
- A significant burden of large (>4-Mb) mCNVs was observed in ASD probands compared to siblings (OR=11.4, P=7.4×10⁻⁴).
- mCNV size positively correlated with the severity of ASD symptoms (P=0.016).
- Mosaic analogues of previously identified short de novo CNVs associated with ASD were not detected.
Conclusions:
- mCNVs represent a significant, previously unaccounted-for genetic risk factor in ASD.
- The findings highlight the importance of considering mosaic events in the genetic architecture of ASD.
- Further research into mCNVs may uncover novel therapeutic targets for ASD.
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