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Successful identification of predictive profiles for infection utilising systems-level immune analysis: a pilot study
Marcel Doerflinger1,2, Alexandra L Garnham2,3, Saskia Freytag3,4
1Infectious Disease and Immune Defence Division Walter and Eliza Hall Institute Parkville VIC Australia.
Objectives:
Patients with multiple myeloma (MM) are at increased risk for infection. Clinical assessment of infection risk is increasingly challenging in the era of immune-based therapy. A pilot systems-level immune analysis study to identify predictive markers for infection was conducted.
Methods:
Patients with relapsed and/or refractory MM (RRMM) who participated in a treatment trial of lenalidomide and dexamethasone were evaluated. Data on patient demographics, disease and episodes of infection were extracted from clinical records. Peripheral blood mononuclear cells (PBMCs) collected at defined intervals were analysed, with or without mitogen re-stimulation, using RNA sequencing and mass cytometry (CyTOF). CyTOF-derived cell subsets and RNAseq gene expression profiles were compared between patients that did and did not develop infection to identify immune signatures that predict infection over a 3-month period.
Results:
Twenty-three patients participated in the original treatment trial, and we were able to access samples from 17 RRMM patients for further evaluation in our study. Nearly half the patients developed an infection (8/17) within 3 months of sample collection. Infections were mostly clinically diagnosed (62.5%), and the majority involved the respiratory tract (87.5%). We did not detect phenotypic or numerical differences in immune cell populations between patients that did and did not develop infections. Transcriptional profiling of stimulated PBMCs revealed distinct Th2 immune pathway signatures in patients that developed infection.
Conclusion:
Immune cell counts were not useful predictors of infection risk. Functional assessment of stimulated PBMCs has identified potential immune profiles that may predict future infection risk in patients with RRMM.
Insights
Predicting infection risk in multiple myeloma patients is challenging. Functional immune cell analysis revealed Th2 pathway signatures that may predict future infections, unlike simple cell counts.
Area of Science:
- Oncology
- Immunology
- Infectious Diseases
Background:
- Patients with multiple myeloma (MM) face a high risk of infection, complicated by modern immune-based therapies.
- Assessing infection risk in relapsed/refractory MM (RRMM) patients is clinically challenging.
- A pilot study explored immune system analysis to find infection predictors.
Purpose of the Study:
- To identify predictive immune markers for infection in RRMM patients.
- To compare immune profiles of patients who did and did not develop infections.
- To evaluate the utility of systems-level immune analysis for infection risk stratification.
Main Methods:
- Analyzed peripheral blood mononuclear cells (PBMCs) from 17 RRMM patients using RNA sequencing and mass cytometry (CyTOF).
- Compared immune cell phenotypes and gene expression profiles between patients who developed infections and those who did not.
- Investigated immune signatures predictive of infection over a 3-month period.
Main Results:
- Nearly half of the patients (8/17) developed infections, primarily respiratory tract infections.
- No significant differences in immune cell populations were observed between infected and non-infected patients.
- Transcriptional profiling identified distinct Th2 immune pathway signatures in patients who developed infections.
Conclusions:
- Immune cell counts are not reliable predictors of infection risk in RRMM patients.
- Functional assessment of stimulated PBMCs revealed potential immune profiles for predicting infection.
- Systems-level immune analysis, particularly transcriptional profiling, shows promise for infection risk assessment.
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