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Updated: Nov 21, 2025

Applying Advanced In Vitro Culturing Technology to Study the Human Gut Microbiota
Published on: February 15, 2019
Dynamics of the preterm gut microbiome in health and disease
Alain Cuna1,2, Michael J Morowitz3, Ishfaq Ahmed4
1Division of Neonatology, Children's Mercy Kansas City, Kansas City, Missouri.
Insights
The preterm infant gut microbiome is fragile and vulnerable. Alterations are linked to serious diseases and future health risks, necessitating research into microbiome manipulation strategies.
Area of Science:
- Microbiome research
- Infant health
- Metagenomics
Background:
- The gut microbiome plays a crucial role in human health and disease.
- Preterm infants have a vulnerable gut microbial ecosystem susceptible to disruption.
- Altered gut microbiomes in preterm infants are associated with severe conditions like necrotizing enterocolitis (NEC) and sepsis, and may influence long-term health outcomes.
Purpose of the Study:
- To review recent literature on the development of the preterm infant gut microbiome during the perinatal period.
- To examine host-microbiome-environmental factors contributing to dysbiosis linked to NEC and sepsis.
- To discuss strategies for microbiome manipulation, including probiotics and prebiotics, to mitigate dysbiosis.
Main Methods:
- Literature review of recent studies on preterm infant gut microbiome development.
- Analysis of factors influencing the development of dysbiotic microbial patterns.
- Discussion of interventions such as probiotics and prebiotics.
Main Results:
- The preterm gut microbiome's origins and developmental patterns are complex.
- Specific host, microbiome, and environmental factors are associated with dysbiosis.
- Probiotics and prebiotics show potential for modulating the preterm gut microbiome.
Conclusions:
- Understanding the preterm gut microbiome is critical for infant health.
- Identifying factors contributing to dysbiosis can inform preventative strategies.
- Further research is needed to optimize microbiome-targeted interventions for preterm infants.
Abstract:
Advances in metagenomics have allowed a detailed study of the gut microbiome, and its role in human health and disease. Infants born prematurely possess a fragile gut microbial ecosystem that is vulnerable to perturbation. Alterations in the developing gut microbiome in preterm infants are linked to life-threatening diseases such as necrotizing enterocolitis (NEC) and late-onset sepsis; and may impact future risk of asthma, atopy, obesity, and psychosocial disease. In this mini-review, we summarize recent literature on the origins and patterns of development of the preterm gut microbiome in the perinatal period. The host-microbiome-environmental factors that portend development of dysbiotic intestinal microbial patterns associated with NEC and sepsis are reviewed. Strategies to manipulate the microbiome and mitigate dysbiosis, including the use of probiotics and prebiotics will also be discussed. Finally, we explore the challenges and future directions of gut microbiome research in preterm infants.
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