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Updated: Nov 21, 2025

From Molecules to Materials: Engineering New Ionic Liquid Crystals Through Halogen Bonding
Published on: March 24, 2018
Lack of Cooperativity in the Triangular X3 Halogen-Bonded Synthon?
Justyna Dominikowska1,2, Agnieszka J Rybarczyk-Pirek1, Célia Fonseca Guerra2,3
1Theoretical and Structural Chemistry Group, Department of Physical Chemistry, Faculty of Chemistry, University of Lodz, Pomorska 163/165, 90-236 Łódź, Poland.
This study examined halogen-bonded X3 synthons in crystal structures. We found minimal evidence of cooperative effects, challenging previous hypotheses about their stabilizing role in halogen bonding.
Area of Science:
- Crystallography
- Computational Chemistry
- Supramolecular Chemistry
Background:
- Halogen bonding is a key non-covalent interaction.
- The X3 synthon, featuring three halogen-halogen contacts, is hypothesized to be stabilized by cooperative effects.
- Previous theoretical studies suggested weak synergy only for iodine-based systems.
Purpose of the Study:
- To computationally investigate cooperativity in type II halogen-halogen contacts within X3 synthons in crystal structures.
- To evaluate the stabilizing role of synergistic interactions in these motifs.
- To test the hypothesis of cooperative effects in triangular halogen-bonded motifs.
Main Methods:
- Analysis of 44 crystal structures from the Cambridge Structural Database.
- Computational investigation of X3 synthons, including halomesitylene structures.
- Theoretical calculations to quantify synergistic interaction energies.
Main Results:
- No significant cooperativity was found for halomesitylene trimers with X3 synthons.
- Very weak or weak synergy (less than -0.40 kcal mol⁻¹) was observed in only two other structures containing the I3 synthon.
- The iodoform crystal structure exhibited the most pronounced cooperativity, approximately 10% of the total interaction energy.
Conclusions:
- The hypothesis of significant cooperative effects stabilizing X3 synthons is largely unsupported by computational analysis of crystal structures.
- Synergistic interactions in these halogen-bonded motifs are minimal, except for specific iodine-containing structures.
- The findings refine our understanding of halogen bond cooperativity and its role in crystal packing.
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