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Updated: Nov 21, 2025

Human Ex vivo Wound Model and Whole-Mount Staining Approach to Accurately Evaluate Skin Repair
Published on: February 17, 2021
Automated Extraction of Skin Wound Healing Biomarkers From In Vivo Label-Free Multiphoton Microscopy Using
Jake D Jones1, Marcos R Rodriguez1, Kyle P Quinn1
1Department of Biomedical Engineering, University of Arkansas, Fayetteville, Arkansas.
Convolutional neural networks (CNNs) automate multiphoton microscopy (MPM) image analysis for skin wound healing. This enables rapid quantification of wound geometry and metabolism, overcoming manual segmentation limitations.
Area of Science:
- Biomedical imaging
- Computational pathology
- Wound healing research
Background:
- Histological analysis is standard for wound healing studies.
- Label-free multiphoton microscopy (MPM) offers natural contrast and metabolic insights.
- Manual segmentation of MPM images is time-consuming, limiting clinical application.
Observation:
- Two convolutional neural networks (CNNs) were trained for MPM image segmentation.
- One CNN segmented wound tissue sections (380 images), the other segmented in vivo wound edge z-stacks (5,848 images).
- Network accuracy was validated against manual measurements.
Findings:
- The wound section CNN achieved 92.83% accuracy, with measurements within 10% error.
- The in vivo CNN achieved 89.66% accuracy, quantifying optical redox ratio within 5% error.
- Automated segmentation enabled accurate wound geometry and metabolic quantification.
Implications:
- CNNs enable automated, rapid quantification of skin wound geometry and metabolism using MPM.
- This overcomes the limitations of manual segmentation, making MPM more practical for wound monitoring.
- MPM with CNNs can provide near real-time quantitative tissue structure and function readouts.
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