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Updated: Nov 21, 2025

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High-resolution In Vivo Manual Segmentation Protocol for Human Hippocampal Subfields Using 3T Magnetic Resonance Imaging
Published on: November 10, 2015
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Deep learning-based automatic delineation of the hippocampus by MRI: geometric and dosimetric evaluation
Kaicheng Pan1, Lei Zhao2, Song Gu3
1Department of Radiation Oncology, The Affiliated Hangzhou Hospital of Nanjing Medical University, Hangzhou, China.
Radiation Oncology (London, England)
|January 15, 2021
Summary
Automatic hippocampal delineation using deep learning shows promising results for improving cognitive function preservation during radiotherapy. This AI approach accurately outlines the hippocampus, potentially reducing workload and enhancing treatment planning.
Area of Science:
- Radiotherapy and Medical Imaging
- Artificial Intelligence in Medicine
- Neuro-oncology
Background:
- Whole brain radiotherapy (WBRT) can lead to cognitive impairments.
- Hippocampal avoidance during WBRT is a strategy to mitigate cognitive side effects.
- Manual delineation of the hippocampus for radiotherapy planning is labor-intensive and challenging.
Purpose of the Study:
- To develop and validate an automatic hippocampal delineation (AD) method using convolutional neural networks.
- To assess the accuracy and clinical feasibility of the AI-driven AD tool compared to manual delineation (MD).
Main Methods:
- A 3D convolutional neural network was trained on 175 manually delineated hippocampus MRI datasets.
- The AD tool was tested on three independent cohorts with varying MRI slice thicknesses.
- Virtual radiation plans were generated using both AD and MD hippocampi to evaluate clinical applicability.
Main Results:
- The AD tool achieved high accuracy, with Dice similarity coefficients (DSC) ranging from 0.76 to 0.86 and Average Hausdorff Distances (AVD) from 0.18 to 0.31 cm across cohorts.
- Performance was superior in the cohort with 1-mm slice thickness 3D T1 MRI.
- No significant differences were found between radiotherapy plans generated with AD and MD hippocampi.
Conclusions:
- Deep learning-based automatic hippocampal delineation is accurate and effective.
- This AI approach has the potential to improve delineation precision and reduce the manual workload in radiotherapy planning.
- The AD method shows clinical feasibility for preserving cognitive function during WBRT.

