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Biofilms01:29

Biofilms

730
Biofilms are complex communities of microorganisms encased in a self-produced extracellular polysaccharide matrix attached to surfaces. These microbial consortia can include single or multiple species, providing enhanced survival benefits by forming organized, multilayered structures.The formation of biofilms occurs through four key stages: attachment, colonization, development, and dispersal.During attachment, free-swimming planktonic cells adhere to a surface, often facilitated by...
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Bacterial Phylum Firmicutes01:27

Bacterial Phylum Firmicutes

498
Firmicutes is a diverse phylum of Gram-positive bacteria characterized by a low GC content in their genomes. This phylum includes organisms with monoderm or diderm cell envelopes, highlighting a complex evolutionary history. Firmicutes comprises several major orders, including Lactobacillales, Clostridiales, and Bacillales, which exhibit remarkable diversity in their morphology, metabolism, and ecological roles.The order Lactobacillales includes lactic acid bacteria, which are fermentative...
498
Microbial Classification System01:24

Microbial Classification System

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Classification is the process of organizing organisms into hierarchically inclusive groups based on their phenotypic similarities or evolutionary relationships. A species comprises one or more strains, and closely related species are grouped into genera. Genera are further classified into families, families into orders, orders into classes, and so forth, up to the domain level, which is the broadest taxonomic rank derived from a combination of phenotypic and genotypic data.The nomenclature of...
529
Bacterial Phylum Planctomycetes01:26

Bacterial Phylum Planctomycetes

236
Planctomycetes are a group of morphologically distinct bacteria predominantly classified into two orders: Planctomycetales and Brocadiales. These gram-negative bacteria exhibit unique features, including division by budding and the presence of stalks or appendages. Their cells are often found in rosette arrangements, and they are notable for possessing an S-layer in their cell envelope, which is relatively uncommon among bacteria. Additionally, Planctomycetes frequently exhibit intracellular...
236
Bacterial Phylum Actinobacteria01:30

Bacterial Phylum Actinobacteria

303
Coryneform bacteria are gram-positive, aerobic, nonmotile rods that exhibit irregular, club-shaped, or V-shaped arrangements. Their V-shape results from snapping division, where the inner cell wall layer forms the cross-wall, while the outer layer remains intact until it ruptures on one side, causing the daughter cells to bend away.The primary genera are Corynebacterium and Arthrobacter. Corynebacterium includes diverse species, ranging from saprophytes to pathogens like Corynebacterium...
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Bacterial Phylum Verrucomicrobiota01:26

Bacterial Phylum Verrucomicrobiota

288
The phylum Verrucomicrobiota comprises at least four characterized orders, with most species classified within the order Verrucomicrobiotales. Members of this phylum are either aerobic or facultatively aerobic, with the ability to ferment sugars. A notable exception is the genus Methylacidiphilum, which consists of aerobic methanotrophs. Additionally, some Verrucomicrobiota establish symbiotic relationships with protists. These bacteria are widely distributed across various environments,...
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Substratum-associated microbiota.

Water environment research : a research publication of the Water Environment Federation·2019
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Related Experiment Video

Updated: Nov 20, 2025

Microbiota of Attine Ants' Gardens: Visualizing a Microbial Landscape by Scanning Electron Microscopy
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Substratum-associated microbiota.

Paula C Furey1, Sylvia S Lee2, Daniel L Clemans3

  • 1Department Biology, St. Catherine University, St. Paul, Minnesota, USA.

Water Environment Research : a Research Publication of the Water Environment Federation
|January 19, 2021
PubMed
Summary
This summary is machine-generated.

This 2019 literature review highlights freshwater benthic microbial research, covering algae, cyanobacteria, and bacteria. It details emerging trends in aquatic environments, including biofilms, pollutants, and harmful algal blooms.

Keywords:
algaebacteriabiofilmcyanobacteriadiatomsmicrobesperiphytonphytobenthos

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Exploring the Root Microbiome: Extracting Bacterial Community Data from the Soil, Rhizosphere, and Root Endosphere
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Area of Science:

  • Environmental Microbiology
  • Aquatic Ecology
  • Microbial Ecology

Background:

  • Substratum-associated microbiota play crucial roles in aquatic ecosystems.
  • Understanding these microbial communities is vital for water quality assessment and management.
  • Recent advancements in research highlight emerging trends in freshwater benthic environments.

Purpose of the Study:

  • To review and summarize key findings on substratum-associated microbiota from the 2019 scientific literature.
  • To identify emerging research trends and topics of interest in freshwater benthic environments.
  • To provide insights relevant to organizations like the Water Environment Federation.

Main Methods:

  • Comprehensive literature survey of 2019 publications focusing on freshwater substratum-associated microbiota.
  • Categorization of findings related to algae, cyanobacteria, and bacteria.
  • Identification of recurring themes and novel discoveries.

Main Results:

  • Algae and cyanobacteria research covered new methods, taxa, nutrient dynamics, interactions, bioassessment, and pollutants (herbicides, metals).
  • Bacterial research focused on benthic biofilms, microbial community ecology, specific genera (e.g., Caulobacter crescentus), and advanced techniques like metagenomics.
  • Emerging topics included harmful algal blooms, toxins, pathogens, and bacterial physiology.

Conclusions:

  • The 2019 literature reveals significant progress in understanding freshwater benthic microbial communities.
  • Key areas of focus include ecological interactions, responses to environmental stressors, and advanced molecular techniques.
  • Continued research is essential for effective management of aquatic environments and water resources.