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Updated: Nov 20, 2025

Understanding Dissolved Organic Matter Biogeochemistry Through In Situ Nutrient Manipulations in Stream Ecosystems
Published on: October 29, 2016
Elucidating stream bacteria utilizing terrestrial dissolved organic matter.
Philips Akinwole1,2, Louis Kaplan3, Robert Findlay4
1Department of Biology, DePauw University, Greencastle, IN, USA. philipsakinwole@depauw.edu.
Terrestrial dissolved organic matter (tDOM) is utilized by various stream bacteria, including aerobic, facultative anaerobic, and anaerobic types. This process significantly contributes to the energy flow within aquatic ecosystems, with microeukaryotes consuming these bacteria.
Area of Science:
- Environmental Microbiology
- Aquatic Ecosystems
- Biogeochemistry
Background:
- Terrestrial dissolved organic matter (tDOM) is a crucial energy source in aquatic ecosystems.
- Microbial utilization of tDOM is significant, but specific bacterial groups involved remain largely undetermined.
Purpose of the Study:
- To identify microbial groups actively utilizing tDOM in stream sediments.
- To understand the role of tDOM in the aquatic ecosystem's energy flow.
Main Methods:
- Phospholipid fatty acid (PLFA) analysis to characterize microbial community structure.
- Stable-isotope probing (SIP) using 13C-labeled tDOM to identify metabolically active microbes.
- Mesocosm incubation experiments with labeled tDOM.
Main Results:
- Prokaryotes constituted 61% of the streambed microbial community.
- Specific bacterial PLFAs showed significant 13C incorporation, identifying aerobic, facultative anaerobic, and anaerobic bacteria as active tDOM utilizers.
- 13C incorporation into microeukaryotic fatty acids suggested bacterial consumption by microeukaryotes.
Conclusions:
- Stream bacteria actively utilize terrestrial dissolved organic matter.
- tDOM substantially contributes to the energy flow in aquatic ecosystems.
- Microbial food webs in streams involve the transfer of tDOM-derived carbon from bacteria to microeukaryotes.
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