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Single-Molecule Fluorescence Visualization of DNA Polymerase Dynamics at G-Quadruplexes
Published on: April 4, 2025
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The solution structures of higher-order human telomere G-quadruplex multimers.
Robert C Monsen1, Srinivas Chakravarthy2, William L Dean3
1Department of Biochemistry & Molecular Genetics, University of Louisville Medical School, Louisville, KY 40202, USA.
Nucleic Acids Research
|January 20, 2021
Summary
Human telomeres feature a 3' single-stranded overhang that forms multimeric G4 structures. These structures exhibit semi-flexibility and present unique drug targeting sites.
Area of Science:
- Structural biology
- Biophysics
- Genetics
Background:
- Human telomeres possess a 3' single-stranded overhang with an unknown structure.
- Existing models for telomeric overhang structure lack certainty.
Purpose of the Study:
- To elucidate the detailed structure of the human telomeric overhang.
- To characterize the folding and flexibility of telomeric overhang sequences.
Main Methods:
- Integrated structural biology approach combining SAXS, CD, AUC, SEC, and MD simulations.
- Analysis of 5'-d(TTAGGG)n sequences (n=8, 12, 16).
- Worm-like chain (WLC) modeling and molecular dynamics simulations.
Main Results:
- Telomeric overhang sequences fold into multimeric G4 structures with contiguous G4 units.
- G4 units exist as a mixture of hybrid-1 and hybrid-2 conformers.
- Multimeric G4 structures are semi-flexible (persistence length ~34 Å) with dynamic movements.
Conclusions:
- The study provides the most detailed structural characterization of the telomeric overhang to date.
- The identified semi-flexible G4 structures offer potential unique sites for drug targeting.
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