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Updated: Nov 20, 2025

Genotyping Single Nucleotide Polymorphisms in the Mitochondrial Genome by Pyrosequencing
Published on: February 10, 2023
Complete mitochondrial genome of Cominate sea catfish Occidentarius platypogon (Siluriformes: Ariidae)
Raúl Llera-Herrera1, Jorge S Ramírez-Pérez2, Nancy C Saavedra-Sotelo3
1Unidad Acuicultura y Manejo Ambiental, CONACYT-Centro de Investigación en Alimentación y Desarrollo A. C., Mazatlán, Sinaloa, Mexico.
Abstract:
The mitochondrion genome of Occidentarius platypogon was assembled from Illumina short reads, and consisted of 16,714 base pairs, with 13 protein-coding, two ribosomal RNAs (rRNAs), and 22 transfer RNA (tRNA) genes. Base composition is 30.7% A, 26.4% T, 28.5% C, and 14.4% G, and 42.9% GC content. Two start codon (ATG and GTG) and seven stop codon (TAA, ACT, CCT, TTA, CAT, AAT, and TAG) patterns were found in protein-coding genes. Control region presented the highest A + T (64%) and lowest G + C content (35.7%) among all mitochondrial regions.
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