Clocks, Viruses, and Immunity: Lessons for the COVID-19 Pandemic
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Updated: Nov 20, 2025

The Use of Mouse Splenocytes to Assess Pathogen-associated Molecular Pattern Influence on Clock Gene Expression
Published on: July 24, 2018
Shaon Sengupta1,2,3,4, Louise Ince5, Francesca Sartor6
1Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Abstract:
Circadian rhythms are evolutionarily conserved anticipatory systems that allow the host to prepare and respond to threats in its environment. This article summarizes a European Biological Rhythms Society (EBRS) workshop held in July 2020 to review current knowledge of the interplay between the circadian clock and viral infections to inform therapeutic strategies against SARS-CoV-2 and COVID-19. A large body of work supports the role of the circadian clock in regulating various aspects of viral replication, host responses, and associated pathogenesis. We review the evidence describing the multifaceted role of the circadian clock, spanning host susceptibility, antiviral mechanisms, and host resilience. Finally, we define the most pressing research questions and how our knowledge of chronobiology can inform key translational research priorities.
Insights
The circadian clock influences viral infections, impacting host responses and disease severity. Understanding this connection can guide new therapeutic strategies for viral diseases like COVID-19.
Area of Science:
- Chronobiology
- Virology
- Immunology
Background:
- Circadian rhythms are internal biological processes that regulate physiological functions over a 24-hour cycle.
- These rhythms play a crucial role in host defense mechanisms and susceptibility to pathogens.
- The interplay between the circadian clock and viral infections is a growing area of research with significant implications for public health.
Purpose of the Study:
- To review current knowledge on the interaction between the circadian clock and viral infections.
- To discuss the role of circadian rhythms in host susceptibility, antiviral responses, and pathogenesis.
- To identify research priorities for developing chronotherapy against viral infections, including SARS-CoV-2.
Main Methods:
- Literature review and synthesis of existing research on circadian rhythms and viral infections.
- Summary of findings from a European Biological Rhythms Society (EBRS) workshop.
- Identification of key research questions and translational opportunities.
Main Results:
- The circadian clock significantly regulates viral replication, host immune responses, and disease progression.
- Evidence highlights the multifaceted role of circadian rhythms in influencing host susceptibility, antiviral immunity, and overall resilience.
- Discussions identified critical knowledge gaps and potential therapeutic targets.
Conclusions:
- The circadian clock is a key determinant in the host-pathogen interaction during viral infections.
- Leveraging chronobiology offers promising avenues for novel therapeutic strategies against viral diseases.
- Further research is needed to translate chronobiological insights into effective clinical interventions for viral infections.
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