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Published on: September 8, 2015
Differential microRNA Expression in USP8-Mutated and Wild-Type Corticotroph Pituitary Tumors Reflect the Difference
Mateusz Bujko1, Paulina Kober1, Joanna Boresowicz1
1Department of Molecular and Translational Oncology, Maria Sklodowska-Curie Institute-Oncology Center, 02-781 Warsaw, Poland.
Background:
USP8 mutations are the most common driver changes in corticotroph pituitary tumors. They have direct effect on cells' proteome through disturbance of ubiquitination process and also influence gene expression. The aim of this study was to compare microRNA profiles in USP8-mutated and wild-type tumors and determine the probable role of differential microRNA expression by integrative microRNA and mRNA analysis.
Methods:
Patients with Cushing's disease (n = 28) and silent corticotroph tumors (n = 20) were included. USP8 mutations were identified with Sanger sequencing. MicroRNA and gene expression was determined with next-generation sequencing.
Results:
USP8-mutated patients with Cushing's disease showed higher rate of clinical remission and trend towards lower tumor volume than wild-type patients. Comparison of microRNA profiles of USP8-mutated and wild-type tumors revealed 68 differentially expressed microRNAs. Their target genes were determined by in silico prediction and microRNA/mRNA correlation analysis. GeneSet Enrichment analysis of putative targets showed that the most significantly overrepresented genes are involved in protein ubiquitination-related processes. Only few microRNAs influence the expression of genes differentially expressed between USP8-mutated and wild-type tumors.
Conclusions:
Differences in microRNA expression in corticotropinomas stratified according to USP8 status reflect disturbed ubiquitination processes, but do not correspond to differences in gene expression between these tumors.
Insights
USP8 mutations in pituitary tumors alter microRNA profiles, reflecting disrupted ubiquitination. However, these microRNA changes do not directly explain gene expression differences between mutated and wild-type tumors.
Area of Science:
- Endocrinology
- Molecular Biology
- Genetics
Background:
- Ubiquitin-specific protease 8 (USP8) mutations are common in pituitary tumors, affecting proteome and gene expression.
- These mutations disrupt the ubiquitination process, a key cellular mechanism.
- Understanding microRNA (miRNA) roles in USP8-mutated tumors is crucial.
Purpose of the Study:
- To compare miRNA profiles in USP8-mutated versus wild-type corticotroph tumors.
- To investigate the functional role of differential miRNA expression via integrated miRNA and mRNA analysis.
Main Methods:
- Next-generation sequencing was used to analyze miRNA and gene expression.
- Sanger sequencing identified USP8 mutations.
- In silico prediction and correlation analysis identified miRNA targets.
Main Results:
- 68 differentially expressed miRNAs were identified between USP8-mutated and wild-type tumors.
- Enriched gene targets were primarily involved in protein ubiquitination.
- Few miRNAs correlated with gene expression differences between tumor types.
Conclusions:
- Differential miRNA expression in corticotropinomas reflects altered ubiquitination processes linked to USP8 status.
- Observed miRNA expression changes do not directly account for gene expression differences between USP8-mutated and wild-type tumors.
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