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Updated: Nov 19, 2025

Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations
Published on: December 7, 2021
Genoscapist: online exploration of quantitative profiles along genomes via interactively customized graphical
Sandra Dérozier1,2, Pierre Nicolas1, Ulrike Mäder3
1Université Paris-Saclay, INRAE, MaIAGE, Jouy-en-Josas 78350, France.
Summary:
Genoscapist is a tool to design web interfaces generating high-quality images for interactive visualization of hundreds of quantitative profiles along a reference genome together with various annotations. Relevance is demonstrated by deployment of two websites dedicated to large condition-dependent transcriptome datasets available for Bacillus subtilis and Staphylococcus aureus.
Availability And Implementation:
Websites and source code freely accessible at https://genoscapist.migale.inrae.fr.
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