Related Experiment Video
Updated: Nov 18, 2025

Native Polyacrylamide Gel Electrophoresis Immunoblot Analysis of Endogenous IRF5 Dimerization
Published on: October 6, 2019
microRNA-1388-5p inhibits NF-κB signaling pathway in miiuy croaker through targeting IRAK1
Renjie Chang1, Weiwei Zheng1, Yuena Sun2
1Laboratory of Fish Molecular Immunology, College of Fisheries and Life Science, Shanghai Ocean University, Shanghai, 201306, China.
Abstract:
Innate immune response is an important response mechanism for the host to achieve self-protection, and it plays an important role in identifying pathogens and resisting pathogen invasion. Growing evidences have shown that microRNA functions as a crucial regulator involved in the host innate immune response. In this study, the regulations of miR-1388-5p to regulate NF-κB signaling pathways via targeting the IRAK1 gene was studied in miiuy croaker. First, through bioinformatics software prediction, we found that IRAK1 is the direct target of miR-1388-5p, and then the prediction results were verified by using dual-luciferase assays. Next, we found that both miR-1388-5p mimics and pre-miR-1388 plasmids inhibit IRAK1 expression by complementing the seed sequence in the 3'-untranslated region (3'-UTR) of IRAK1. Finally, we observed that miR-1388-5p could negatively regulate NF-κB pathways through targeting IRAK1. These results provide new insights into the function of miR-1388-5p in fish innate immunity, meanwhile enriching miRNA-mediated regulatory networks.
Insights
MicroRNA miR-1388-5p regulates the innate immune response in miiuy croaker by targeting the IRAK1 gene. This microRNA negatively controls the NF-κB signaling pathway, enhancing host self-protection against pathogens.
Area of Science:
- Immunology
- Molecular Biology
- Genetics
Background:
- The innate immune response is vital for host defense against pathogens.
- MicroRNAs (miRNAs) are key regulators of innate immunity.
- Understanding miRNA functions in fish immunity is crucial for aquaculture and disease resistance.
Purpose of the Study:
- To investigate the role of miR-1388-5p in the innate immune response of miiuy croaker.
- To identify the target gene regulated by miR-1388-5p.
- To elucidate the mechanism by which miR-1388-5p modulates the NF-κB signaling pathway.
Main Methods:
- Bioinformatics analysis to predict miRNA-target interactions.
- Dual-luciferase reporter assays to validate target gene.
- Inhibition of target gene expression using miR-1388-5p mimics and plasmids.
- Assessment of NF-κB pathway activation.
Main Results:
- Bioinformatics predicted IRAK1 as a direct target of miR-1388-5p.
- Dual-luciferase assays confirmed IRAK1 as the target gene.
- miR-1388-5p significantly inhibited IRAK1 expression.
- miR-1388-5p negatively regulated the NF-κB signaling pathway via IRAK1 targeting.
Conclusions:
- miR-1388-5p acts as a negative regulator of the NF-κB pathway in miiuy croaker innate immunity.
- The miR-1388-5p/IRAK1 interaction provides new insights into fish immune regulation.
- This study expands the knowledge of miRNA-mediated regulatory networks in fish.
Related Concept Videos
NF-κB-dependent Signaling Pathway
NF-κB-dependent Signaling Mechanism
The...
MicroRNAs
MicroRNAs
Regulation of the Unfolded Protein Response
Experimental RNAi
RNA Interference
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...

