iTRAQ-based analysis for the identification of MARCH8 targets in human esophageal squamous cell carcinoma

Shivam Singh1, Arjumand Bano1, Anoop Saraya2

  • 1University School of Biotechnology, Guru Gobind Singh Indraprastha University, Sector-16(C), Dwarka, New Delhi 110078, India.

Journal of Proteomics
|February 4, 2021
PubMed

Insights

MARCH8 E3 ligase aberrant expression in esophageal cancer was investigated. New targets, including CDH1 and beta-2-microglobulin (β2M), were identified, revealing MARCH8

Area of Science:

  • Molecular Biology
  • Oncology
  • Proteomics

Background:

  • MARCH8, an E3 ligase, is implicated in immune modulation and aberrantly expressed in esophageal squamous cell carcinoma (ESCC).
  • The precise mechanisms by which MARCH8 influences cancer progression remain incompletely understood.

Purpose of the Study:

  • To identify downstream protein targets of MARCH8 using high-throughput quantitative proteomics.
  • To elucidate the role of MARCH8 in regulating protein turnover and its impact on ESCC.

Main Methods:

  • High-throughput quantitative proteomics (LC-MS/MS) was employed to analyze protein expression changes after MARCH8 knockdown in ESCC cells.
  • Interaction and ubiquitination assays were performed for MARCH8 with identified targets.
  • Correlation analysis was conducted between MARCH8 expression and target protein levels in ESCC tissues.

Main Results:

  • Over 1,000 unique proteins showed altered expression upon MARCH8 silencing, including known targets (TFR1, CD44) and novel candidates like beta-2-microglobulin (β2M).
  • MARCH8 was shown to interact with and ubiquitinate CDH1 and β2M, targeting them for proteasomal degradation.
  • Loss of β2M and CDH1 expression inversely correlated with MARCH8 expression in ESCC tissues.

Conclusions:

  • This study identifies novel MARCH8 targets, CDH1 and β2M, and demonstrates MARCH8's role in regulating their turnover in esophageal cancer.
  • MARCH8's function extends beyond immunomodulation, affecting protein processing and localization, potentially aiding cancer cells in immune evasion.

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