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An Immunofluorescent Method for Characterization of Barrett’s Esophagus Cells
Published on: July 20, 2014
iTRAQ-based analysis for the identification of MARCH8 targets in human esophageal squamous cell carcinoma
Shivam Singh1, Arjumand Bano1, Anoop Saraya2
1University School of Biotechnology, Guru Gobind Singh Indraprastha University, Sector-16(C), Dwarka, New Delhi 110078, India.
Abstract:
MARCH8 is an E3 ligase, primarily involved in immune-modulation. Recently, we reported its aberrant expression in human esophageal squamous cell carcinoma. However, exact mechanisms by which it regulates cancer have been poorly understood. We applied high-throughput quantitative proteomics approach to identify downstream protein targets of MARCH8. Silencing of endogenous MARCH8 in ESCC cells followed by LC-MS/MS analysis led to identification of 1,029 unique proteins showing altered expression post MARCH8 knockdown. Several previously reported MARCH8 target proteins viz. TFR1, syntaxin-4, e-cadherin and CD44 were found to be upregulated. Furthermore, new putative targets of MARCH8, including β2M, were identified in the present study. We demonstrated that MARCH8 interacts with and ubiquitinates CDH1 and β2M. Inhibiting proteasome activity with MG132 prevented CDH1 and β2M degradation, indicating that MARCH8 might be targeting CDH1 and β2M for proteasomal degradation. Further, loss of β2M and CDH1 expression significantly and inversely correlated with MARCH8 expression in ESCC tissues (r = -0.737 and - 0.651, respectively; p < 0.01). In conclusion, our present study has led to identification of new targets of MARCH8 and suggests the role of MARCH8 in regulating CDH1 and β2M turnover in esophageal cancer cells. SIGNIFICANCE: The use of quantitative proteomics carried out has led to the recognition of new targets of MARCH8. The present study gives a broad understanding of the molecular remodeling arising in the ESCC after MARCH8 knockdown. The study also solidifies the idea that role of MARCH8 is not just limited to immunomodulation as silencing of MARCH8 affects various other processes such as protein processing and localization. This study might help in understanding the regulation of MARCH8 in ESCCs and the mechanism by which MARCH8 might be facilitating cancer cells to evade immune surveillance.
Insights
MARCH8 E3 ligase aberrant expression in esophageal cancer was investigated. New targets, including CDH1 and beta-2-microglobulin (β2M), were identified, revealing MARCH8
Area of Science:
- Molecular Biology
- Oncology
- Proteomics
Background:
- MARCH8, an E3 ligase, is implicated in immune modulation and aberrantly expressed in esophageal squamous cell carcinoma (ESCC).
- The precise mechanisms by which MARCH8 influences cancer progression remain incompletely understood.
Purpose of the Study:
- To identify downstream protein targets of MARCH8 using high-throughput quantitative proteomics.
- To elucidate the role of MARCH8 in regulating protein turnover and its impact on ESCC.
Main Methods:
- High-throughput quantitative proteomics (LC-MS/MS) was employed to analyze protein expression changes after MARCH8 knockdown in ESCC cells.
- Interaction and ubiquitination assays were performed for MARCH8 with identified targets.
- Correlation analysis was conducted between MARCH8 expression and target protein levels in ESCC tissues.
Main Results:
- Over 1,000 unique proteins showed altered expression upon MARCH8 silencing, including known targets (TFR1, CD44) and novel candidates like beta-2-microglobulin (β2M).
- MARCH8 was shown to interact with and ubiquitinate CDH1 and β2M, targeting them for proteasomal degradation.
- Loss of β2M and CDH1 expression inversely correlated with MARCH8 expression in ESCC tissues.
Conclusions:
- This study identifies novel MARCH8 targets, CDH1 and β2M, and demonstrates MARCH8's role in regulating their turnover in esophageal cancer.
- MARCH8's function extends beyond immunomodulation, affecting protein processing and localization, potentially aiding cancer cells in immune evasion.

