Related Experiment Video
Updated: Nov 18, 2025

Visualization of SARS-CoV-2 using Immuno RNA-Fluorescence In Situ Hybridization
Published on: December 23, 2020
Mechanisms of Coronavirus Nsp1-Mediated Control of Host and Viral Gene Expression
Keisuke Nakagawa1, Shinji Makino2,3,4,5,6
1Laboratory of Veterinary Microbiology, Joint Department of Veterinary Medicine, Gifu University, Gifu 501-1193, Japan.
Abstract:
Many viruses disrupt host gene expression by degrading host mRNAs and/or manipulating translation activities to create a cellular environment favorable for viral replication. Often, virus-induced suppression of host gene expression, including those involved in antiviral responses, contributes to viral pathogenicity. Accordingly, clarifying the mechanisms of virus-induced disruption of host gene expression is important for understanding virus-host cell interactions and virus pathogenesis. Three highly pathogenic human coronaviruses (CoVs), including severe acute respiratory syndrome (SARS)-CoV, Middle East respiratory syndrome (MERS)-CoV, and SARS-CoV-2, have emerged in the past two decades. All of them encode nonstructural protein 1 (nsp1) in their genomes. Nsp1 of SARS-CoV and MERS-CoV exhibit common biological functions for inducing endonucleolytic cleavage of host mRNAs and inhibition of host translation, while viral mRNAs evade the nsp1-induced mRNA cleavage. SARS-CoV nsp1 is a major pathogenic determinant for this virus, supporting the notion that a viral protein that suppresses host gene expression can be a virulence factor, and further suggesting the possibility that SARS-CoV-2 nsp1, which has high amino acid identity with SARS-CoV nsp1, may serve as a major virulence factor. This review summarizes the gene expression suppression functions of nsp1 of CoVs, with a primary focus on SARS-CoV nsp1 and MERS-CoV nsp1.
Insights
Coronaviruses use nonstructural protein 1 (nsp1) to suppress host gene expression and aid viral replication. This protein is a key factor in coronavirus pathogenicity and virulence.
Area of Science:
- Virology
- Molecular Biology
- Pathogenesis
Background:
- Viruses often disrupt host gene expression to promote viral replication.
- Suppression of host gene expression, particularly antiviral responses, contributes to viral pathogenicity.
- Understanding these mechanisms is crucial for deciphering virus-host interactions and pathogenesis.
Purpose of the Study:
- To review the gene expression suppression functions of nonstructural protein 1 (nsp1) in coronaviruses (CoVs).
- To focus on the roles of nsp1 from severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV).
- To highlight nsp1 as a potential major virulence factor in SARS-CoV-2.
Main Methods:
- Literature review of studies on CoV nsp1 functions.
- Comparative analysis of nsp1 functions across different CoVs, including SARS-CoV, MERS-CoV, and SARS-CoV-2.
- Focus on mechanisms of host mRNA degradation and translation inhibition.
Main Results:
- Nsp1 proteins from SARS-CoV and MERS-CoV share common functions in degrading host mRNAs and inhibiting host translation.
- Viral mRNAs are selectively protected from nsp1-mediated cleavage.
- SARS-CoV nsp1 is identified as a major pathogenic determinant, suggesting similar roles for SARS-CoV-2 nsp1.
Conclusions:
- Nsp1 is a critical viral protein involved in suppressing host gene expression.
- Nsp1 functions as a significant virulence factor in pathogenic coronaviruses.
- Further investigation into SARS-CoV-2 nsp1 is warranted due to its high similarity to SARS-CoV nsp1.
Related Concept Videos
Viruses with RNA Genomes
Regulation of Expression Occurs at Multiple Steps
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Regulation of Expression Occurs at Multiple Steps
Regulation of Nuclear Protein Sorting
Leaky Scanning
siRNA - Small Interfering RNAs
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the...

