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Generative chemistry: drug discovery with deep learning generative models.

Yuemin Bian1,2, Xiang-Qun Xie3,4,5,6

  • 1Department of Pharmaceutical Sciences and Computational Chemical Genomics Screening Center, School of Pharmacy, University of Pittsburgh, Pittsburgh, PA, 15261, USA.

Journal of Molecular Modeling
|February 5, 2021
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Summary
This summary is machine-generated.

Deep learning generative models offer a creative solution for accelerating drug discovery by designing novel molecular structures. This review explores generative chemistry advancements, focusing on AI architectures for efficient compound generation.

Keywords:
Adversarial autoencoderDeep learningDrug discoveryGenerative adversarial networkGenerative modelRecurrent neural networkVariational autoencoder

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Area of Science:

  • Computational chemistry
  • Artificial intelligence in drug discovery
  • Generative modeling

Background:

  • Drug discovery costs are rising, necessitating innovative approaches.
  • Deep learning generative models demonstrate advanced capabilities in creating novel molecular structures.
  • Artificial intelligence is emerging as a transformative paradigm in the pharmaceutical industry.

Purpose of the Study:

  • To review recent advancements in generative chemistry for drug discovery.
  • To outline the history and evolution of AI in drug discovery.
  • To provide an overview of the infrastructure supporting generative chemistry.

Main Methods:

  • Review of artificial intelligence in drug discovery.
  • Analysis of chemical databases, molecular representations, and cheminformatics tools.
  • Detailed discussion of generative architectures: recurrent neural networks, variational autoencoders, adversarial autoencoders, and generative adversarial networks.

Main Results:

  • Generative models, including RNNs, VAEs, AAEs, and GANs, are effectively utilized for de novo compound generation.
  • Established infrastructure (databases, representations, tools) supports generative chemistry applications.
  • The review highlights the potential of these models to expedite the drug discovery pipeline.

Conclusions:

  • Deep learning generative models represent a significant advancement in de novo molecular design for drug discovery.
  • The integration of AI, particularly generative chemistry, offers a promising avenue to overcome the challenges of new drug development.
  • Future perspectives and challenges in generative chemistry are identified, paving the way for further innovation.