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Chalcogen bonds: Hierarchical ab initio benchmark and density functional theory performance study.

Lucas de Azevedo Santos1,2, Teodorico C Ramalho2,3, Trevor A Hamlin1

  • 1Department of Theoretical Chemistry, Amsterdam Institute of Molecular and Life Sciences (AIMMS), Amsterdam Center for Multiscale Modeling (ACMM), Vrije Universiteit Amsterdam, Amsterdam, Netherlands.

Journal of Computational Chemistry
|February 5, 2021
PubMed
Summary

This study benchmarks relativistic quantum chemical methods for D2 Ch•••A- chalcogen bonds. M06-2X, B3LYP, and M06 functionals show the best performance for predicting these interactions.

Keywords:
benchmark studychalcogen bondscoupled-clusterdensity functional calculationsnoncovalent interactions

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Area of Science:

  • Computational Chemistry
  • Quantum Chemistry
  • Chemical Physics

Background:

  • Chalcogen bonds are crucial non-covalent interactions.
  • Accurate theoretical methods are needed to study D2 Ch•••A- chalcogen bonds.
  • Relativistic effects are important for these systems.

Purpose of the Study:

  • To perform a hierarchical ab initio benchmark of relativistic quantum chemical methods.
  • To evaluate the performance of various ZORA-relativistic Density Functional Theory (DFT) functionals.
  • To identify accurate and efficient methods for studying D2 Ch•••A- chalcogen bonds.

Main Methods:

  • Hierarchical ab initio calculations using ZORA-relativistic methods (HF, MP2, CCSD, CCSD(T)).
  • Utilized Karlsruhe basis sets (ZORA-def2-SVP, ZORA-def2-TZVPP, ZORA-def2-QZVPP) with and without diffuse functions.
  • Assessed 13 ZORA-relativistic DFT approaches with the Slater-type QZ4P basis set, using benchmark results as reference.

Main Results:

  • Highest-level ab initio complexation energies (ΔE_CPC) converged within 1.1-3.4 kcal/mol.
  • M06-2X, B3LYP, and M06 functionals demonstrated the best performance among DFT methods.
  • These top functionals yielded mean absolute errors (MAE) of 4.1, 4.2, and 4.3 kcal/mol, respectively.

Conclusions:

  • ZORA-relativistic DFT methods, particularly M06-2X, B3LYP, and M06, are suitable for studying D2 Ch•••A- chalcogen bonds.
  • The chosen ab initio methods provide reliable benchmark data for DFT performance evaluation.
  • This work offers guidance for selecting accurate computational methods in chalcogen bond research.