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Related Experiment Video

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Intranuclear immunostaining-based FACS protocol from embryonic cortical tissue.

M Sadman Sakib1, Godwin Sokpor2, Huu Phuc Nguyen2

  • 1German Center for Neurodegenerative Diseases, 37077 Goettingen, Germany.

STAR Protocols
|February 8, 2021
PubMed
Summary
This summary is machine-generated.

This study introduces an improved intranuclear immunostaining method for fluorescence-activated cell sorting (FACS), enabling better purification of basal intermediate progenitors from embryonic brain tissue for molecular analysis.

Keywords:
Flow Cytometry/Mass CytometryGenomicsNeuroscience

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Area of Science:

  • Neuroscience
  • Cell Biology
  • Genomics

Background:

  • Cell sorting is crucial for isolating specific cell populations for molecular studies.
  • Fluorescence-activated cell sorting (FACS) combined with high-throughput sequencing aids in identifying cell-specific molecular signatures.
  • Current FACS methods face challenges in comprehensively purifying brain cells, limiting detailed molecular characterization.

Purpose of the Study:

  • To present an optimized intranuclear immunostaining-based FACS protocol.
  • To enable enhanced purification of specific cell types from embryonic cortical tissue.
  • To facilitate downstream molecular investigation of basal intermediate progenitors.

Main Methods:

  • Development of a modified intranuclear immunostaining protocol for FACS.
  • Application of the protocol to mouse and human embryonic cortical tissue.
  • Optimization of nuclei/cell sorting for downstream molecular analysis.

Main Results:

  • The developed protocol allows for optimized sorting of nuclei/cells from embryonic cortical samples.
  • This method addresses limitations of standard FACS in brain cell purification.
  • Enables distinct downstream molecular investigation of specific progenitor populations.

Conclusions:

  • The intranuclear immunostaining-based FACS protocol enhances cell purification efficiency from embryonic brain tissue.
  • This optimized method supports comprehensive molecular characterization of basal intermediate progenitors.
  • The protocol is applicable to both mouse and human embryonic cortical samples.