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Experiments and simulation on ZIKV NS2B-NS3 protease reveal its complex folding.
Ankur Kumar1, Prateek Kumar1, Murali Aarthy2
1School of Basic Sciences, Indian Institute of Technology Mandi, Mandi, 175005, Himachal Pradesh, India.
Virology
|February 9, 2021
Summary
The Zika virus NS2B-NS3 protease remains stable across a wide pH range (4.8-8.7), suggesting it can function in diverse body fluids. However, environmental changes like alcohol significantly alter its structure and activity.
Area of Science:
- Virology
- Structural Biology
- Biochemistry
Background:
- Zika virus is found in various body fluids with differing pH levels.
- Understanding viral protein function under various conditions is crucial.
Purpose of the Study:
- To investigate the stability and activity of the Zika virus NS2B-NS3 protease.
- To determine the impact of varying pH and denaturing environments on protease function.
Main Methods:
- Assessed NS2B-NS3 protease stability and activity across a pH range of 4.8-8.7.
- Examined structural changes in the presence of alcohol using spectroscopic methods.
Main Results:
- The NS2B-NS3 protease demonstrated stability and maintained hydrolytic activity within a broad pH range (4.8-8.7).
- Environmental factors, particularly alcohol, induced significant structural alterations, increasing beta-strand and helix content.
Conclusions:
- The Zika virus NS2B-NS3 protease is functionally active in diverse pH environments found in body fluids.
- Protease activity and structure are sensitive to denaturing agents, impacting polyprotein hydrolysis.
- Findings contribute to understanding flaviviral protease folding-function relationships.
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