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Published on: July 17, 2019
Mutations in the RAS/MAPK Pathway Drive Replication Repair-Deficient Hypermutated Tumors and Confer Sensitivity to
Brittany B Campbell1,2, Melissa A Galati1,2, Simone C Stone3
1Program in Genetics and Genome Biology, The Hospital for Sick Children, Toronto, Ontario, Canada.
Abstract:
The RAS/MAPK pathway is an emerging targeted pathway across a spectrum of both adult and pediatric cancers. Typically, this is associated with a single, well-characterized point mutation in an oncogene. Hypermutant tumors that harbor many somatic mutations may obscure the interpretation of such targetable genomic events. We find that replication repair-deficient (RRD) cancers, which are universally hypermutant and affect children born with RRD cancer predisposition, are enriched for RAS/MAPK mutations (P = 10-8). These mutations are not random, exist in subclones, and increase in allelic frequency over time. The RAS/MAPK pathway is activated both transcriptionally and at the protein level in patient-derived RRD tumors, and these tumors responded to MEK inhibition in vitro and in vivo. Treatment of patients with RAS/MAPK hypermutant gliomas reveals durable responses to MEK inhibition. Our observations suggest that hypermutant tumors may be addicted to oncogenic pathways, resulting in favorable response to targeted therapies. SIGNIFICANCE: Tumors harboring a single RAS/MAPK driver mutation are targeted individually for therapeutic purposes. We find that in RRD hypermutant cancers, mutations in the RAS/MAPK pathway are enriched, highly expressed, and result in sensitivity to MEK inhibitors. Targeting an oncogenic pathway may provide therapeutic options for these hypermutant polyclonal cancers.This article is highlighted in the In This Issue feature, p. 1307.
Insights
Replication repair-deficient (RRD) cancers show increased RAS/MAPK pathway mutations. These hypermutant tumors are sensitive to MEK inhibitors, offering new targeted therapy options.
Area of Science:
- Oncology
- Genetics
- Molecular Biology
Background:
- The RAS/MAPK pathway is a key target in cancer therapy, typically driven by single oncogene mutations.
- Hypermutant tumors, characterized by numerous somatic mutations, can complicate the identification of actionable genomic alterations.
- Replication repair-deficient (RRD) cancers are hypermutant and often affect children with genetic predispositions.
Purpose of the Study:
- To investigate the role of RAS/MAPK pathway mutations in RRD cancers.
- To determine if RRD hypermutant tumors are sensitive to targeted therapies like MEK inhibition.
Main Methods:
- Analysis of RAS/MAPK mutation enrichment in RRD cancers.
- Assessment of RAS/MAPK pathway activation at transcriptional and protein levels in patient-derived RRD tumors.
- Evaluation of MEK inhibitor efficacy in vitro and in vivo models, and in patient treatment.
Main Results:
- RRD cancers exhibit significant enrichment of RAS/MAPK pathway mutations (P = 10^-8).
- These mutations are subclonal, increase in frequency over time, and lead to pathway activation.
- MEK inhibition demonstrated efficacy in vitro, in vivo, and resulted in durable responses in patients with RRD hypermutant gliomas.
Conclusions:
- Hypermutant RRD cancers are addicted to the RAS/MAPK pathway, making them susceptible to targeted therapies.
- Targeting the activated RAS/MAPK pathway offers a promising therapeutic strategy for polyclonal hypermutant cancers.
- This study highlights the potential of pathway-targeted therapy in RRD hypermutant tumors.
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