Common differentially expressed genes and pathways correlating both coronary artery disease and atrial fibrillation

Youjing Zheng1, Jia-Qiang He1

  • 1Department of Biomedical Sciences and Pathobiology, College of Veterinary Medicine, Virginia Tech, Blacksburg, VA 24061, USA.

EXCLI Journal
|February 10, 2021
PubMed

Insights

This study identified 21 common genes linking coronary artery disease (CAD) and atrial fibrillation (AF). These genes highlight key proteins like MME, TfR1, and LAMP1, suggesting their crucial role in the development of both cardiovascular conditions.

Area of Science:

  • Cardiovascular Biology
  • Molecular Genetics
  • Bioinformatics

Background:

  • Coronary artery disease (CAD) and atrial fibrillation (AF) frequently coexist, sharing risk factors like hypertension and diabetes.
  • The molecular mechanisms underlying the concurrent occurrence of CAD and AF remain poorly understood.

Purpose of the Study:

  • To identify common differentially expressed genes (DEGs) associated with both CAD and AF.
  • To elucidate the molecular pathways and protein interactions involved in the shared pathogenesis of CAD and AF.

Main Methods:

  • Analysis of gene expression datasets (GSE71226 for CAD, GSE31821 for AF) using GEO2R.
  • Identification of common DEGs via Venn Diagram analysis.
  • Pathway and enrichment analysis using KEGG, DAVID, and STRING databases.

Main Results:

  • Identified 565 up- and 1367 down-regulated genes in CAD, and 293 up- and 68 down-regulated genes in AF.
  • Discovered 21 common DEGs between CAD and AF datasets.
  • Uncovered 4 CAD-related and 21 AF-related pathways, 3 significant gene enrichments, and 3 key proteins: MME, TfR1, and LAMP1.

Conclusions:

  • The identified 21 common DEGs provide molecular insights into the shared development of CAD and AF.
  • The proteins MME, TfR1, and LAMP1 emerge as potentially central players in the pathogenesis of both conditions.
  • Further research into these proteins could reveal novel therapeutic targets for patients with coexisting CAD and AF.

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