Related Experiment Video
Updated: Nov 17, 2025

A Model for Perineural Invasion in Head and Neck Squamous Cell Carcinoma
Published on: January 5, 2017
Immune Cluster and PPI Network Analyses Identified CXCR3 as a Key Node of Immunoregulation in Head and Neck Cancer
Ping Wang1, Yanli Wang1, Yuanjun Jiang2
1Department of Radiation Oncology, The First Hospital of China Medical University, Shenyang, China.
Abstract:
The tumor microenvironment (TME) is significantly associated with clinical outcomes and therapeutic efficacy. However, the landscape of the head and neck cancer (HNC) microenvironment is not fully understood. Therefore, we divided HNCs into three classes according to differences in the TME to determine effective personalized treatments. We explored the immune landscape of head and neck cancer by analysing the gene expression profile of 501 cases from the Cancer Genome Atlas (TCGA) data portal and validated our findings in 270 cases from the Gene Expression Omnibus (GEO) database. The levels of immune components in the tumor microenvironment were evaluated via single-sample gene set enrichment (ssGSEA) analysis. The HNCs were clustered into an Immunity-H group, Immunity-M group and Immunity-L group according to 40 immune components in the tumor microenvironment. DNA damage and HLA genes play an important role in immune regulation. The patients in the Immunity-H group had a favourable survival compared with patients in the Immunity-M group and the Immunity-L group. The patients in the Immunity-H group and Immunity-M group could benefit from radiotherapy. In addition, the Immunity-L group showed the lowest immunophenoscore and had poor response to anti-PD-1 treatment. CXCR3 was demonstrated to be downregulated in the Immunity-L group, which was related to shorter OS in the TCGA and GEO databases, suggesting CXCR3 as a potential therapeutic target. Taken together, our findings proposed three new microenvironment-related phenotypes of HNCs and suggested that CXCR3 played a major role in immune regulation and could be a novel therapeutic target, providing a reference for clinical decisions and research directions in the future.
Insights
We identified three distinct head and neck cancer (HNC) phenotypes based on their tumor microenvironment (TME). The high-immunity group showed better survival, while the low-immunity group responded poorly to immunotherapy, highlighting CXCR3 as a therapeutic target.
Area of Science:
- Oncology
- Immunology
- Genomics
Background:
- The tumor microenvironment (TME) significantly impacts head and neck cancer (HNC) outcomes and treatment effectiveness.
- A comprehensive understanding of the HNC TME is crucial for developing personalized therapies.
Purpose of the Study:
- To classify HNCs into distinct groups based on TME characteristics.
- To identify potential therapeutic targets and predict treatment responses for different HNC phenotypes.
Main Methods:
- Analysis of gene expression profiles from TCGA (501 cases) and GEO (270 cases) databases.
- Utilized single-sample gene set enrichment (ssGSEA) analysis to quantify immune components.
- Clustered HNCs into Immunity-H, Immunity-M, and Immunity-L groups based on 40 immune components.
Main Results:
- Identified three distinct HNC phenotypes: Immunity-H, Immunity-M, and Immunity-L.
- The Immunity-H group exhibited favorable survival. Patients in Immunity-H and Immunity-M groups may benefit from radiotherapy.
- The Immunity-L group displayed a low immunophenoscore, poor response to anti-PD-1 therapy, and downregulated CXCR3, correlating with shorter overall survival (OS).
Conclusions:
- Proposed three novel TME-related phenotypes for HNC.
- CXCR3 is identified as a key regulator in immune response and a potential therapeutic target in HNC.
- Findings provide a basis for personalized treatment strategies and future research in HNC.
More Related Videos
06:56A Flow Cytometry-based Assay to Identify Compounds That Disrupt Binding of Fluorescently-labeled CXC Chemokine Ligand 12 to CXC Chemokine Receptor 4
Published on: March 10, 2018
10:21Author Spotlight: Exploring the Role of Inflammation in the Co-occurrence of Primary Sjogren's Syndrome and Lung Adenocarcinoma
Published on: September 20, 2024