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A novel multiple instance learning framework for COVID-19 severity assessment via data augmentation and
Zekun Li1, Wei Zhao2, Feng Shi3
1State Key Laboratory for Novel Software Technology, Nanjing University, Nanjing, 210046, China; National Institute of Healthcare Data Science, Nanjing University, Nanjing, 210046, China.
This study introduces a novel three-component method for accurately assessing COVID-19 severity using chest CT scans. The approach effectively addresses data limitations and improves diagnostic accuracy for coronavirus disease 2019 (COVID-19).
Area of Science:
- Medical Imaging
- Artificial Intelligence
- Computational Pathology
Background:
- Accurate COVID-19 severity assessment is crucial during the pandemic.
- Chest CT scans are valuable for COVID-19 diagnosis but face challenges like weak annotation and insufficient data for automated analysis.
- Existing methods for automated severity assessment using CT images are limited by data scarcity and annotation quality.
Purpose of the Study:
- To develop and evaluate a novel method for fast and accurate COVID-19 severity assessment from chest CT images.
- To overcome limitations of weak annotation and insufficient data in automated CT-based COVID-19 analysis.
- To improve the performance of deep learning models in classifying COVID-19 severity.
Main Methods:
- A three-component method integrating deep multiple instance learning with instance-level attention.
- Bag-level data augmentation using high-confidence instances to generate virtual data.
- Self-supervised learning pretext task to enhance the training process.
- Systematic evaluation on a dataset of 229 COVID-19 cases (50 severe, 179 non-severe).
Main Results:
- Achieved an average accuracy of 95.8% in COVID-19 severity assessment.
- Demonstrated high diagnostic performance with 93.6% sensitivity and 96.4% specificity.
- Outperformed previous methods in automated COVID-19 severity classification using CT images.
Conclusions:
- The proposed method effectively addresses challenges in automated COVID-19 severity assessment from CT scans.
- The integration of multiple instance learning, data augmentation, and self-supervised learning significantly enhances diagnostic accuracy.
- This approach offers a promising tool for rapid and reliable evaluation of COVID-19 severity, aiding clinical decision-making.
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