23-valent polysaccharide vaccine (PPSV23)-targeted serotype-specific identification of Streptococcus pneumoniae using

Jiwon Lee1,2,3, Youngbae Yoon1,2,3, Eun Jin Kim1,2,3

  • 1Division of Pediatric Dentistry, Department of Human Development and Fostering, Meikai University School of Dentistry, Saitama, Japan.

Plos One
|February 16, 2021
PubMed

Insights

A new loop-mediated isothermal amplification (LAMP) assay rapidly detects Streptococcus pneumoniae serotypes targeted by PPSV23 vaccine. This method offers a simple, cost-effective tool for identifying pneumococcal serotypes not covered by other vaccines.

Area of Science:

  • Microbiology
  • Vaccinology
  • Molecular Diagnostics

Background:

  • Invasive pneumococcal disease (IPD) incidence has declined with pneumococcal conjugate vaccines (PCV7, PCV13).
  • However, non-vaccine serotypes of Streptococcus pneumoniae are increasing, posing a global health challenge.
  • Previous work established a LAMP assay for PCV13 serotypes.

Purpose of the Study:

  • To develop a rapid, simple, and cost-effective loop-mediated isothermal amplification (LAMP) assay for detecting serotypes covered by the 23-valent pneumococcal polysaccharide vaccine (PPSV23).
  • To validate the clinical feasibility of the developed LAMP assay for identifying S. pneumoniae serotypes in invasive pneumococcal disease cases.

Main Methods:

  • Development of LAMP primer sets for 11 specific S. pneumoniae serotypes included in PPSV23.
  • Determination of LAMP assay reactivity, specificity, and sensitivity, comparing results with conventional PCR.
  • Validation of clinical feasibility using bacterial genomic DNA-spiked blood specimens to establish the limit of detection.

Main Results:

  • Successfully developed LAMP primer sets for 11 PPSV23 serotypes.
  • The LAMP assay demonstrated high sensitivity (100 copies/reaction) and specificity against 44 pneumococcal serotypes.
  • Detection limits in spiked blood specimens were comparable to purified DNA, significantly lower than PCR methods.

Conclusions:

  • A rapid, simple, and cost-effective LAMP-based assay for detecting PPSV23-targeted pneumococcal serotypes has been successfully developed.
  • This represents the first report of a LAMP assay for identifying PPSV23 serotypes.
  • Further evaluation through surveillance and vaccine efficacy studies is recommended.

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