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Updated: Nov 17, 2025

Oral Biofilm Sampling for Microbiome Analysis in Healthy Children
Published on: December 31, 2017
Ethnic variability associating gut and oral microbiome with obesity in children
Baskar Balakrishnan1, Vaithinathan Selvaraju2, Jun Chen3
1Department of Immunology, Mayo Clinic , Rochester, MN, USA.
Insights
Obesity disparities in children are linked to gut and oral microbes. Microbial profiles differ by ethnicity, with specific bacteria associated with obesity in African American and European American children.
Area of Science:
- Microbiome research
- Pediatric health
- Health disparities
Background:
- Obesity is a global health concern, disproportionately affecting minority populations.
- Early-life obesity requires identification of predictive indicators.
- Understanding ethnic-specific microbial contributions to obesity is crucial.
Purpose of the Study:
- To profile gut and oral microbiota associated with obesity in African American (AA) and European American (EA) children.
- To identify microbial clades predictive of obesity status across different ethnicities.
- To explore the influence of socioeconomic factors on ethnicity-specific microbial profiles.
Main Methods:
- 16S rDNA sequencing of gut and saliva microbial communities.
- Correlation analysis with salivary amylase and socioeconomic factors.
- Comparison of microbial diversity (alpha, beta, taxa-level) between ethnic groups and obesity status.
Main Results:
- Significant differences in gut and oral microbial diversity were observed between AA and EA children.
- Gut microbes *Klebsiella* and *Magasphaera* abundance linked to obesity in AA children.
- Oral microbes *Aggregatibacter* and *Eikenella* abundance linked to obesity in EA children.
- Gut microbial diversity differences between obese and non-obese children were not evident in EA children.
Conclusions:
- Gut and oral microbial profiles show ethnicity-specific associations with childhood obesity.
- Socioeconomic factors modulate obesity-related microbiota in an ethnicity-dependent manner.
- Tailored, population-specific strategies are needed to address childhood obesity.
Abstract:
Obesity is a growing worldwide problem that generally starts in the early years of life and affects minorities more often than Whites. Thus, there is an urgency to determine factors that can be used as targets as indicators of obesity. In this study, we attempt to generate a profile of gut and oral microbial clades predictive of disease status in African American (AA) and European American (EA) children. 16S rDNA sequencing of the gut and saliva microbial profiles were correlated with salivary amylase, socioeconomic factors (e.g., education and family income), and obesity in both ethnic populations. Gut and oral microbial diversity between AA and EA children showed significant differences in alpha-, beta-, and taxa-level diversity. While gut microbial diversity between obese and non-obese was not evident in EA children, the abundance of gut Klebsiella and Magasphaera was associated with obesity in AA children. In contrast, an abundance of oral Aggregatibacter and Eikenella in obese EA children was observed. These observations suggest an ethnicity-specific association with gut and oral microbial profiles. Socioeconomic factors influenced microbiota in obesity, which were ethnicity dependent, suggesting that specific approaches to confront obesity are required for both populations.
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