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A multi-resolution model for histopathology image classification and localization with multiple instance learning.

Jiayun Li1, Wenyuan Li1, Anthony Sisk2

  • 1Computational Diagnostics Lab, UCLA, 924 Westwood Blvd Suite 600, Los Angeles, CA, 90024, USA; Department of Radiology, UCLA, 924 Westwood Blvd Suite 600, Los Angeles, CA, 90024, USA.

Computers in Biology and Medicine
|February 18, 2021
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Summary
This summary is machine-generated.

This study introduces a novel computational model for analyzing prostate biopsy whole slide images. The multi-resolution multiple instance learning approach accurately predicts cancer grade using only slide-level labels, enhancing diagnostic efficiency.

Keywords:
Convolutional neural networkImage classification prostate cancerMultiple instance learningWhole slide images

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Area of Science:

  • Digital pathology
  • Computational image analysis
  • Machine learning in histopathology

Background:

  • Whole slide imaging (WSI) generates large datasets, offering potential for computational analysis to aid pathologists.
  • Previous WSI analysis often requires detailed region annotations, limiting scalability for large datasets.
  • Developing automated tools is crucial for reducing workload and improving diagnostic consistency in pathology.

Purpose of the Study:

  • To develop an end-to-end computational model for prostate cancer grading using whole slide images.
  • To overcome the limitations of fine-grained annotations by utilizing slide-level labels.
  • To leverage saliency maps for detecting suspicious regions within whole slide images.

Main Methods:

  • Proposed a multi-resolution multiple instance learning (MIL) model.
  • Integrated saliency maps to guide the detection of critical regions for grade prediction.
  • Trained the model using only slide-level labels, eliminating the need for pixel- or region-level annotations.

Main Results:

  • Achieved 92.7% accuracy and 81.8% Cohen's Kappa for predicting benign, low-grade, and high-grade prostate cancer.
  • Demonstrated high performance in differentiating malignant and benign slides with an AUROC of 98.2% and AP of 97.4%.
  • Validated cancer detection on an external dataset with an AUROC of 99.4% and AP of 99.8%.

Conclusions:

  • The developed MIL model effectively predicts prostate cancer grade from whole slide images using slide-level labels.
  • This approach significantly reduces the annotation burden and shows high accuracy in clinical settings.
  • The model demonstrates strong potential for improving diagnostic efficiency and accuracy in digital pathology.