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EPA Method 1615. Measurement of Enterovirus and Norovirus Occurrence in Water by Culture and RT-qPCR. I. Collection of Virus Samples
Published on: March 28, 2015
Circulation of enterovirus A71 during 2019-2020, Marseille, France
Léa Luciani1,2, Aurélie Morand3,4, Christine Zandotti1,2
1Unité des Virus Émergents (UVE: Aix-Marseille University, IRD 190, Inserm 1207), Marseille, France.
Abstract:
Enteroviruses A71 (EVs-A71) are known to cause serious neurological infections, especially in the pediatric population. We report here eight cases of EV-A71 infection diagnosed in Marseille over the past 2 years (seven cases in 2019 and one case in 2020). Only children under 5 years of age were affected, including one case of acute flaccid paralysis. Viral RNA was detected by RT-PCR in peripheral samples for all cases (feces and upper respiratory samples). Phylogenetic analyses based on VP1 and 2C3C coding regions revealed that all these cases of EV-A71 infection were caused by viruses belonging to the subgenogroup C1 that currently circulates in Europe and that these viruses are genetically closed to other EVs-A71 recently detected in European countries. These data therefore reinforce the usefulness of the enterovirus surveillance network and the need for systematic screening for EV-A71 in case of an enteroviral infection. This study therefore suggests that the systematic screening for EV-A71 in case of enteroviral infection could provide additional data for enterovirus surveillance networks.
Insights
Enteroviruses A71 (EV-A71) infections in young children, including one case of acute flaccid paralysis, were identified in Marseille. Phylogenetic analysis confirmed the circulation of the European subgenogroup C1, highlighting the need for enhanced surveillance.
Area of Science:
- Virology
- Infectious Diseases
- Pediatrics
Background:
- Enteroviruses A71 (EV-A71) are significant pathogens causing severe neurological infections, particularly in children.
- EV-A71 outbreaks pose a public health concern due to potential neurological complications.
Purpose of the Study:
- To report and characterize recent cases of EV-A71 infection in Marseille.
- To determine the genetic lineage of circulating EV-A71 strains.
- To emphasize the importance of EV-A71 surveillance in enteroviral infections.
Main Methods:
- Retrospective case series analysis of eight EV-A71 infections diagnosed between 2019 and 2020.
- Detection of viral RNA using reverse transcription-polymerase chain reaction (RT-PCR) in fecal and upper respiratory samples.
- Phylogenetic analysis of the VP1 and 2C3C coding regions to determine viral subgenogroup.
Main Results:
- Eight cases of EV-A71 infection were diagnosed in children under 5 years old, including one instance of acute flaccid paralysis.
- All identified EV-A71 strains belonged to subgenogroup C1, consistent with currently circulating European strains.
- The detected viruses showed close genetic relationships to other recently identified EV-A71 strains in Europe.
Conclusions:
- Recent EV-A71 infections in Marseille underscore the continued circulation of this pathogen in the pediatric population.
- Phylogenetic data confirm the prevalence of the EV-A71 subgenogroup C1 in Europe.
- Systematic EV-A71 screening during enteroviral infections is crucial for enhancing surveillance networks and understanding transmission patterns.
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