Related Experiment Video
Updated: Nov 16, 2025

Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package
Published on: September 17, 2021
Uncertainty estimation for molecular dynamics and sampling
Giulio Imbalzano1, Yongbin Zhuang2, Venkat Kapil1
1Laboratory of Computational Science and Modeling, IMX, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland.
Abstract:
Machine-learning models have emerged as a very effective strategy to sidestep time-consuming electronic-structure calculations, enabling accurate simulations of greater size, time scale, and complexity. Given the interpolative nature of these models, the reliability of predictions depends on the position in phase space, and it is crucial to obtain an estimate of the error that derives from the finite number of reference structures included during model training. When using a machine-learning potential to sample a finite-temperature ensemble, the uncertainty on individual configurations translates into an error on thermodynamic averages and leads to a loss of accuracy when the simulation enters a previously unexplored region. Here, we discuss how uncertainty quantification can be used, together with a baseline energy model, or a more robust but less accurate interatomic potential, to obtain more resilient simulations and to support active-learning strategies. Furthermore, we introduce an on-the-fly reweighing scheme that makes it possible to estimate the uncertainty in thermodynamic averages extracted from long trajectories. We present examples covering different types of structural and thermodynamic properties and systems as diverse as water and liquid gallium.
More Related Videos
10:52Multiscale Sampling of a Heterogeneous Water/Metal Catalyst Interface using Density Functional Theory and Force-Field Molecular Dynamics
Published on: April 12, 2019
10:22Split Point Analysis and Uncertainty Quantification of Thermal-Optical Organic/Elemental Carbon Measurements
Published on: September 7, 2019
Related Concept Videos
Uncertainty: Overview
Propagation of Uncertainty from Systematic Error
Propagation of Uncertainty from Random Error
The Uncertainty Principle
Uncertainty: Confidence Intervals
Uncertainty in Measurement: Accuracy and Precision