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Updated: Nov 16, 2025

Controlling the Size, Shape and Stability of Supramolecular Polymers in Water
Published on: August 2, 2012
Convergence behaviour of solvation shells in simulated liquids
Jas Kalayan1, Richard H Henchman1
1Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, Manchester M1 7DN, UK. jas.kalayan@manchester.ac.uk and Department of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, UK.
Solvation shell analysis reveals locally defined shells differ significantly from solute-centric ones. A new hybrid method is proposed to restore convergence in analyzing solvent structure around solutes.
Area of Science:
- Computational chemistry
- Molecular dynamics simulations
- Physical chemistry
Background:
- Solvation shells discretize solvent positions around a solute.
- Two main definitions exist: solute-centric and locally defined.
- Local definitions may not be directly comparable.
Purpose of the Study:
- To analyze and compare properties of locally defined solvation shells.
- To investigate deviations from bulk properties in pure solvents.
- To propose a method for restoring convergence in shell analysis.
Main Methods:
- Simulations of five pure liquids of differing polarity.
- Local shell definition using radial distribution function minima and Relative Angular Distance (RAD).
- Analysis of potential energy, coordination number, and coordination radius.
Main Results:
- Locally defined shell properties deviate from bulk values, not converging.
- Deviations increase with shell index due to interconnectedness of molecules.
- RAD and water show amplified deviations due to structure and interactions.
Conclusions:
- Locally defined solvation shells are not directly comparable to solute-centric shells.
- Box size and cutoff influence shell convergence.
- A hybrid method is proposed to define shells for improved convergence.
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