Identifying selective agonists targeting LXRβ from terpene compounds of alismatis rhizoma
Chuanjiong Lin1, Jianzong Li1, Chuanfang Wu2
1Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610065, Sichuan, P.R. China.
Abstract:
Hyperlipidemia is thought of as an important contributor to coronary disease, diabetes, and fatty liver. Liver X receptor β (LXRβ) was considered as a validated target for hyperlipidemia therapy due to its role in regulating cholesterol homeostasis and immunity. However, many current drugs applied in clinics are not selectively targeting LXRβ, and they can also activate LXRα which activates SREBP-1c that worked as an activator of lipogenic genes. Therefore, exploiting agonists selectively targeting LXRβ is urgent. Here, computational tools were used to screen potential agonists selectively targeting LXRβ from 112 terpenes of alismatis rhizoma. Firstly, a structural analysis between selective and nonselective agonists was used to explore key residues of selective binding with LXRβ. Our data indicated that Phe271, Ser278, Met312, His435, and Trp457 were important to compounds binding with LXRβ, suggesting that engaging ligand interaction with these residues may provide directions for the development of ligands with improved selective profiles. Then, ADMET analysis, molecular docking, MD simulations, and calculation of binding free energy and its decomposition were executed to screen the agonists whose bioactivity was favorable from 112 terpenes of alismatis rhizoma. We found that two triterpenes 16-hydroxy-alisol B 23-acetate and alisol M 23-acetate showed favorable ADMET properties and high binding affinity against LXRβ. These compounds could be considered as promising selective agonists targeting LXRβ. Our work provides an alternative strategy for screening agonists selectively targeting LXRβ from alismatis rhizoma for hyperlipidemia disease treatment.
Insights
Researchers identified two natural compounds from Alismatis Rhizoma that selectively target Liver X receptor beta (LXRβ). These compounds show promise for treating hyperlipidemia by offering a more targeted approach than current therapies.
Area of Science:
- Pharmacology and Computational Chemistry
- Molecular Biology and Drug Discovery
Background:
- Hyperlipidemia is a significant risk factor for coronary disease, diabetes, and fatty liver.
- Liver X receptor beta (LXRβ) is a validated therapeutic target for hyperlipidemia due to its role in cholesterol homeostasis.
- Existing drugs targeting LXRβ often lack selectivity, activating LXRα and promoting lipogenesis, necessitating the development of selective LXRβ agonists.
Purpose of the Study:
- To computationally screen for selective Liver X receptor beta (LXRβ) agonists from Alismatis Rhizoma terpenes.
- To identify key amino acid residues involved in selective LXRβ ligand binding.
- To evaluate the potential of identified compounds as therapeutic agents for hyperlipidemia.
Main Methods:
- In silico screening of 112 terpenes from Alismatis Rhizoma.
- Structural analysis to identify key residues for selective LXRβ binding (Phe271, Ser278, Met312, His435, Trp457).
- ADMET analysis, molecular docking, MD simulations, and binding free energy calculations.
Main Results:
- Two triterpenes, 16-hydroxy-alisol B 23-acetate and alisol M 23-acetate, demonstrated favorable ADMET properties.
- These compounds exhibited high binding affinity and selectivity for LXRβ.
- Key residues Phe271, Ser278, Met312, His435, and Trp457 were identified as crucial for selective binding.
Conclusions:
- 16-hydroxy-alisol B 23-acetate and alisol M 23-acetate are promising selective LXRβ agonists.
- These compounds offer a potential new therapeutic strategy for hyperlipidemia.
- Computational screening provides an effective approach for discovering selective LXRβ agonists from natural products.
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