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In Silico Identification and Characterization of circRNAs During Host-Pathogen Interactions
Published on: October 21, 2022
Overview of host miRNA properties and their association with epigenetics, long non-coding RNAs, and Xeno-infectious
Samaneh Heydarzadeh1, Maryam Ranjbar2, Farokh Karimi3
1Department of Medical Genetics, Faculty of Medicine, Tabriz University of Medical Sciences, Tabriz, Iran.
Abstract:
MicroRNA-derived structures play impressive roles in various biological processes. So dysregulation of miRNAs can lead to different human diseases. Recent studies have extended our comprehension of the control of miRNA function and features. Here, we overview some remarkable miRNA properties that have potential implications for the miRNA functions, including different variants of a miRNA called isomiRs, miRNA arm selection/arm switching, and the effect of these factors on miRNA target selection. Besides, we review some aspects of miRNA interactions such as the interaction between epigenetics and miRNA (different miRNAs and their related processing enzymes are epigenetically regulated by multiple DNA methylation enzymes. moreover, DNA methylation could be controlled by diverse mechanisms related to miRNAs), direct and indirect crosstalk between miRNA and lnc (Long Non-Coding) RNAs as a further approach to conduct intercellular regulation called "competing endogenous RNA" (ceRNA) that is involved in the pathogenesis of different diseases, and the interaction of miRNA activities and some Xeno-infectious (virus/bacteria/parasite) factors, which result in modulation of the pathogenesis of infections. This review provides some related studies to a better understanding of miRNA involvement mechanisms and overcoming the complexity of related diseases that may be applicable and useful to prognostic, diagnostic, therapeutic purposes and personalized medicine in the future.
Insights
MicroRNAs (miRNAs) and their variants, like isomiRs, influence biological processes and disease. This review explores miRNA properties, interactions with epigenetics and long non-coding RNAs, and roles in infections for future medical applications.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- MicroRNAs (miRNAs) are crucial regulators of gene expression involved in numerous biological processes.
- Dysregulation of miRNA function is linked to the development of various human diseases.
- Recent research has deepened the understanding of miRNA control mechanisms and their functional implications.
Purpose of the Study:
- To provide a comprehensive overview of key miRNA properties and interactions.
- To highlight the significance of isomiRs, miRNA arm selection, and arm switching in target selection.
- To review the complex interplay between miRNAs, epigenetics, long non-coding RNAs (lncRNAs), and infectious agents.
Main Methods:
- Literature review and synthesis of recent studies on miRNA biology and function.
- Analysis of miRNA variants (isomiRs) and their impact on miRNA activity.
- Examination of miRNA interactions with epigenetic factors, lncRNAs (ceRNA network), and xenobiotic factors.
Main Results:
- IsomiRs, miRNA arm selection, and arm switching significantly affect miRNA target specificity.
- Epigenetic modifications, particularly DNA methylation, intricately regulate miRNA expression and processing.
- miRNA crosstalk with lncRNAs via the competing endogenous RNA (ceRNA) mechanism and interactions with infectious agents modulate disease pathogenesis.
Conclusions:
- Understanding these complex miRNA regulatory mechanisms is vital for deciphering disease complexity.
- The findings offer potential applications for prognostic, diagnostic, and therapeutic strategies, including personalized medicine.
- Further research into miRNA involvement can lead to novel interventions for various human diseases and infections.
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