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A Novel Aza-Derivative Inhibits agr Quorum Sensing Signaling and Synergizes Methicillin-Resistant Staphylococcus
Giulia Bernabè1, Matteo Dal Pra2, Vittoria Ronca1
1Department of Molecular Medicine, University of Padua, Padua, Italy.
Abstract:
Increasing antibiotic resistance and diminishing pharmaceutical industry investments have increased the need for molecules that can treat infections caused by dangerous pathogens such as methicillin-resistant Staphylococcus aureus (MRSA). Quorum Sensing (QS) is a signaling mechanism that regulates bacterial virulence in pathogens. A report demonstrating that the anti-inflammatory drug Diflunisal reduces MRSA virulence factors' expression prompted us to design, synthesize and test 16 aza-analogs as inhibitors of S. aureus virulence factors controlled by the accessory gene regulator (agr) QS system. At first, we evaluated by qRT-PCR the activity of compounds on rnaIII expression, a QS related gene. Azan-7 was the most active molecule tested and it did not show cytotoxic activity in human cell lines. Moreover, we demonstrated that it did not affect bacterial proliferation. Regulation of MRSA virulence genes by Azan-7 was investigated using qRT-PCR and RNAseq. Azan-7 significantly reduced hla, psmα, hysA, agrA, cap1A, and cap1C gene expression. In silico docking demonstrated that Azan-7 binds the response regulator AgrA. This data was confirmed by electrophoretic mobility shift assay (EMSA) reporting that Azan-7 binding to AgrA protein strongly reduced the AgrA-DNA complex formation at the P3 promoter region involved in the regulation of rnaIII transcription. Azan-7 inhibited MRSA-mediated haemolysis, reduced survival of the pathogen at low pH levels, and increased macrophage killing. In addition, Azan-7 enhanced MRSA susceptibility to clindamycin both in planktonic growth and biofilm. Azan-7 did not induce resistance over 10 days in culture. It was equally active against all the AgrA MRSA subtypes encountered among clinical isolates, but it was not active against Staphylococcus epidermidis, although the AgrA proteins show an approximate 80% homology. These results demonstrate that Azan-7 inhibits the expression of MRSA virulence factors by interfering in the QS and synergizes MRSA biofilm with clindamycin, indicating the compound as a promising candidate for the treatment of MRSA infections.
Insights
A novel compound, Azan-7, effectively inhibits methicillin-resistant Staphylococcus aureus (MRSA) virulence by disrupting quorum sensing (QS) and enhances antibiotic efficacy, offering a new strategy against resistant infections.
Area of Science:
- Microbiology
- Pharmacology
- Medicinal Chemistry
Background:
- Rising antibiotic resistance and decreased pharmaceutical investment necessitate new treatments for dangerous pathogens like MRSA.
- Quorum Sensing (QS) is a critical bacterial communication system regulating virulence in pathogens.
- Previous research indicated anti-inflammatory drugs could reduce MRSA virulence factors.
Purpose of the Study:
- To design, synthesize, and evaluate aza-analogs as inhibitors of MRSA virulence factors.
- To investigate the mechanism of action of promising compounds on the accessory gene regulator (agr) QS system.
- To assess the therapeutic potential of lead compounds against MRSA infections.
Main Methods:
- Synthesis and evaluation of 16 aza-analogs for their impact on the `rnaIII` gene expression via qRT-PCR.
- In vitro assays to determine cytotoxicity, effect on bacterial proliferation, and virulence factor gene expression (qRT-PCR, RNAseq).
- Molecular modeling (in silico docking) and biochemical assays (EMSA) to elucidate target interaction.
- Functional assays including haemolysis inhibition, low pH survival, macrophage killing, and synergy with clindamycin.
Main Results:
- Azan-7 emerged as the most potent inhibitor of `rnaIII` expression, showing no cytotoxicity or impact on bacterial growth.
- Azan-7 significantly downregulated key MRSA virulence genes (`hla`, `psm`α, `hysA`, `agrA`, `cap1A`, `cap1C`) by binding to the AgrA response regulator.
- Azan-7 inhibited MRSA haemolysis, enhanced macrophage killing, reduced survival at low pH, and potentiated clindamycin activity in planktonic and biofilm states without inducing resistance.
Conclusions:
- Azan-7 effectively inhibits MRSA virulence by interfering with the AgrA-mediated QS system.
- Azan-7 demonstrates synergistic activity with clindamycin, presenting a promising strategy for combating MRSA infections.
- The compound's specific activity against MRSA subtypes suggests a targeted therapeutic approach.
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