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Paper-based PCR method development, validation and application for microbial detection
Amruta Patil-Joshi1, B E Rangaswamy1, Anjali Apte-Deshpande2
1Department of Biotechnology, BIET, Davangere, Karnataka, 577004, India.
Journal, Genetic Engineering & Biotechnology
|March 1, 2021
Summary
A novel paper-based PCR method offers rapid detection of foodborne contaminants like bacteria and fungi in milk. This fast, accurate technique significantly reduces testing time from hours to minutes, enhancing food safety.
Area of Science:
- Food Safety and Microbiology
- Molecular Diagnostics
- Biosensor Technology
Background:
- Food quality analysis is crucial for preventing foodborne illnesses from pathogens.
- Current pathogen detection methods are often time-consuming and labor-intensive.
- Rapid identification of contaminants is essential for ensuring food safety.
Purpose of the Study:
- To develop a specific and rapid method for detecting contaminants in milk.
- To create a user-friendly, paper-based diagnostic tool for food safety applications.
Main Methods:
- Developed a paper-based polymerase chain reaction (PCR) method utilizing Whatman paper no. 1 as a sample carrier.
- Employed 16S rDNA universal primers for bacterial detection, LacZ primers for coliforms, and ITS region primers for fungal detection.
- Minimized sample preparation steps for increased efficiency and ease of use.
Main Results:
- Successfully developed and validated a paper-based PCR method for microbial and coliform detection in milk.
- The method demonstrated high specificity and accuracy, comparable to traditional microbial detection techniques.
- Achieved significant time reduction, with results available in 2-3 hours compared to 18-20 hours for traditional methods.
Conclusions:
- The paper-based PCR method is a suitable and effective tool for detecting contaminant microbes in various milk samples.
- This rapid detection system offers a promising alternative to conventional methods, especially in time-sensitive testing scenarios.
- The developed technology enhances food safety by providing quick and reliable contaminant identification.

