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Updated: Nov 15, 2025

Semiconductor Sequencing for Preimplantation Genetic Testing for Aneuploidy
Published on: August 25, 2019
Blastocyst conversion rate and ploidy in patients with structural rearrangements
Iris G Insogna1, A Lanes2, L Dobson2
1Brigham and Women's Hospital, Department of Obstetrics and Gynecology, Division of Reproductive Endocrinology and Infertility, Harvard Medical School, 3rd floor ASB, 75 Francis Street, Boston, MA, 02115, USA. iinsogna@partners.org.
In vitro fertilization (IVF) cycles with preimplantation genetic testing for structural rearrangements (PGT-SR) show similar blastocyst development rates as PGT for aneuploidy (PGT-A) but yield fewer usable embryos for transfer. Pregnancy outcomes remain comparable across PGT types when a viable embryo is transferred.
Area of Science:
- Reproductive Medicine and Genetics
- Assisted Reproductive Technologies (ART)
- Embryology and Preimplantation Genetic Testing
Background:
- Preimplantation genetic testing (PGT) encompasses various techniques, including PGT for aneuploidy (PGT-A), PGT for monogenic disorders (PGT-M), and PGT for structural rearrangements (PGT-SR).
- Understanding the comparative efficiency and outcomes of different PGT methods is crucial for optimizing IVF treatment protocols.
- Previous studies have suggested potential differences in blastocyst development and embryo utilization among PGT subtypes.
Purpose of the Study:
- To compare blastocyst conversion rates and the availability of usable blastocysts between IVF cycles undergoing PGT-SR versus PGT-A (with or without PGT-M).
- To evaluate secondary outcomes, specifically pregnancy rates, implantation rates, and miscarriage rates across different PGT groups.
- To test the hypothesis that PGT-SR cycles result in poorer blastocyst development and fewer usable embryos compared to PGT-A cycles.
Main Methods:
- A retrospective cohort study was conducted, analyzing IVF cycles initiated between January 1, 2012, and March 30, 2020.
- Cycles included in the study involved intent for PGT-A, PGT-A with PGT-M, or PGT-SR, all utilizing trophectoderm biopsy on days 5 or 6 of development.
- Statistical adjustments were made for patient age, total mature oocytes, BMI, and intracytoplasmic sperm injection (ICSI) to account for confounding factors.
Main Results:
- A total of 902 cycles were analyzed: 607 PGT-A, 216 PGT-A&M, and 79 PGT-SR.
- Blastocyst conversion rates did not significantly differ between PGT-A (59.4%), PGT-A&M (69.7%), and PGT-SR (63.2%) groups after adjusted analysis.
- The proportion of usable blastocysts was significantly lower in PGT-SR (24.4%) and PGT-A&M (31.5%) groups compared to the PGT-A group (35.1%). Implantation, pregnancy, and miscarriage rates were equivalent across all groups.
Conclusions:
- Patients undergoing PGT-SR demonstrate comparable blastocyst development rates to those undergoing PGT-A.
- However, PGT-SR cycles yield a significantly lower number of usable blastocysts available for embryo transfer.
- Despite the reduced number of usable embryos, pregnancy outcomes are equivalent among PGT groups when a viable embryo is transferred, suggesting PGT-SR is effective when suitable embryos are available.
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