Toward a Monte Carlo approach to selecting climate variables in MaxEnt.
John L Schnase1, Mark L Carroll1, Roger L Gill1
1Office of Computational and Information Sciences and Technology, NASA Goddard Space Flight Center, Greenbelt, Maryland, United States of America.
Plos One
|March 3, 2021
Summary
A new Monte Carlo method enables efficient screening of large climate datasets for species distribution modeling. This approach effectively identifies key environmental predictors, improving climate change impact assessments.
Area of Science:
- Ecology
- Climate Science
- Computational Biology
Background:
- Species distribution models (SDMs) like MaxEnt are crucial for understanding climate change impacts.
- Global climate model (GCM) outputs are valuable environmental predictors but are often too large for direct use in MaxEnt.
- MaxEnt's memory limitations restrict the number of environmental predictors that can be analyzed simultaneously.
Purpose of the Study:
- To demonstrate a feasible Monte Carlo method for selecting optimal environmental predictors from large GCM datasets for MaxEnt.
- To overcome the computational limitations of using extensive climate data in species distribution modeling.
- To enable broader use of GCM outputs in ecological research.
Main Methods:
- A Monte Carlo ensemble approach was employed, involving numerous MaxEnt runs with small, random subsets of predictors.
- This method converges on a global estimate of the most influential predictor subset from a large, externally stored collection.
- The approach is designed to be scalable and amenable to parallel processing.
Main Results:
- Preliminary tests successfully identified a consistent set of top six predictor variables within 540 runs.
- The top four most contributory variables accounted for approximately 93% of the permutation importance in the final model.
- The Monte Carlo method efficiently screened a large predictor set in a reasonable timeframe.
Conclusions:
- The Monte Carlo approach offers a viable solution for pre-screening environmental predictors for MaxEnt modeling.
- This method facilitates the use of large GCM datasets, enhancing species distribution analyses.
- The approach supports scalable, potentially near-real-time implementations for broader ecological modeling applications.
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