Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Compartment Models: Single-Compartment Model01:14

Compartment Models: Single-Compartment Model

2.8K
The single-compartment model serves as a simplified representation of the human body. This model assumes that the body functions as a single, well-mixed open compartment. When a drug is administered intravenously, it enters the body and quickly distributes uniformly. The drug then undergoes biotransformation and elimination, ultimately leaving the body. The volume of this compartment is referred to as the apparent volume of distribution into which the drug can uniformly distribute. In this...
2.8K
Compartment Models: Two-Compartment Model01:20

Compartment Models: Two-Compartment Model

6.5K
The two-compartment model divides the body into central and peripheral compartments to account for varying blood perfusion rates among organs and tissues, affecting drug distribution. The central compartment includes blood and highly perfused tissues with rapid drug distribution, while the peripheral compartment contains tissues with slower drug distribution. After a single IV bolus dose, the drug concentration is high in plasma and low in tissues. The drug distribution between compartments...
6.5K
Mechanistic Models: Overview of Compartment Models01:21

Mechanistic Models: Overview of Compartment Models

241
Mechanistic models, a category encompassing both physiological and compartmental modeling, differ from empirical models' approaches to incorporating known factors about the systems being modeled. Empirical models describe data with minimal assumptions, while mechanistic models aim to provide a robust description of available data by specifying assumptions and integrating known factors about the system. Compartmental analysis is a key example of a mechanistic model in pharmacokinetics and...
241
Multicompartment Models: Overview01:14

Multicompartment Models: Overview

354
Multicompartment models are mathematical constructs that depict how drugs are distributed and eliminated within the body. They segment the body into several compartments, symbolizing various physiological or anatomical areas connected through drug transfer processes such as absorption, metabolism, distribution, and elimination.
These models offer a more comprehensive representation of drug behavior in the body than one-compartment models. They accommodate the complexity of drug distribution,...
354
Clearance Models: Compartment Models01:25

Clearance Models: Compartment Models

189
Clearance measures drug elimination from the central compartment, including plasma and highly perfused organs like kidneys and liver. Its calculation varies depending on pharmacokinetic models and administration routes. The one-compartment model, for instance, portrays the pharmacokinetics of polar drugs such as aminoglycoside antibiotics administered intravenously and readily excreted in urine. In this case, clearance is influenced by the terminal rate constant (λz) and the total volume...
189
Three-Compartment Open Model01:06

Three-Compartment Open Model

635
The three-compartment open model is a pharmacokinetic model used to describe the distribution and elimination of drugs following extravascular administration. It comprises a central compartment representing the plasma and two peripheral compartments. The highly perfused peripheral compartment represents organs and tissues with a rich blood supply, such as the liver, kidneys, and lungs. The scarcely perfused peripheral compartment represents tissues with lower blood supply, such as adipose...
635

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Application of machine-learning algorithms to identify the key determinants of risk for HIV, hepatitis C and hepatitis B in primary care settings.

BMC infectious diseases·2026
Same author

Oxygen therapy for children with an oxygen saturation of 90-93% in Malawi: the NoGoLO<sub>2</sub> pilot randomised controlled trial.

BMJ paediatrics open·2026
Same author

CoMind R1: a time-resolved interferometric optical neuromonitoring system for pulsatile cerebral blood flow measurement at late times-of-flight.

Neurophotonics·2026
Same author

Understanding pulse oximetry adoption in primary healthcare facilities in Nigeria: a realist process evaluation of the INSPIRING-Lagos stabilisation room project.

BMJ public health·2025
Same author

The potential impact of declining development assistance for health on population health in Malawi: A modelling study.

PLoS medicine·2025
Same author

Development and validation of a novel clinical risk score to predict hypoxaemia in children with pneumonia using the WHO PREPARE dataset.

BMJ global health·2025
Same journal

Another 10 years of PLOS Computational Biology: A data-driven reflection on trends in genomics research.

PLoS computational biology·2026
Same journal

Mobility data resolution needed to inform predictive models of spatial epidemic spread from mobile phone data.

PLoS computational biology·2026
Same journal

DeepMethylation: A deep learning framework for tissue-specific DNA methylation prediction and functional variant annotation.

PLoS computational biology·2026
Same journal

Redefining and estimating the early-phase reproduction ratio for epidemic outbreaks in spatially structured populations.

PLoS computational biology·2026
Same journal

Optimized phenotype definitions boost GWAS power.

PLoS computational biology·2026
Same journal

Detection, communication, and individual identification with deep audio embeddings: A case study with North Atlantic right whales.

PLoS computational biology·2026
See all related articles

Related Experiment Video

Updated: Nov 15, 2025

Author Spotlight: Optimizing CFPS Systems for Synthetic Cell Construction
07:43

Author Spotlight: Optimizing CFPS Systems for Synthetic Cell Construction

Published on: April 19, 2024

3.5K

Testing, tracing and isolation in compartmental models.

Simone Sturniolo1, William Waites2, Tim Colbourn3

  • 1Scientific Computing Department, UKRI, Rutherford Appleton Laboratory, Harwell, United Kingdom.

Plos Computational Biology
|March 4, 2021
PubMed
Summary
This summary is machine-generated.

This study introduces a new SEIR-TTI model that accurately incorporates testing, contact tracing, and isolation strategies into epidemic modeling. This computationally efficient method aids in planning disease outbreak management and evaluating public health interventions.

More Related Videos

Social Isolation Model: A Noninvasive Rodent Model of Stress and Anxiety
04:20

Social Isolation Model: A Noninvasive Rodent Model of Stress and Anxiety

Published on: November 11, 2022

4.9K
Evaluation of Cancer Stem Cell Migration Using Compartmentalizing Microfluidic Devices and Live Cell Imaging
09:36

Evaluation of Cancer Stem Cell Migration Using Compartmentalizing Microfluidic Devices and Live Cell Imaging

Published on: December 23, 2011

25.6K

Related Experiment Videos

Last Updated: Nov 15, 2025

Author Spotlight: Optimizing CFPS Systems for Synthetic Cell Construction
07:43

Author Spotlight: Optimizing CFPS Systems for Synthetic Cell Construction

Published on: April 19, 2024

3.5K
Social Isolation Model: A Noninvasive Rodent Model of Stress and Anxiety
04:20

Social Isolation Model: A Noninvasive Rodent Model of Stress and Anxiety

Published on: November 11, 2022

4.9K
Evaluation of Cancer Stem Cell Migration Using Compartmentalizing Microfluidic Devices and Live Cell Imaging
09:36

Evaluation of Cancer Stem Cell Migration Using Compartmentalizing Microfluidic Devices and Live Cell Imaging

Published on: December 23, 2011

25.6K

Area of Science:

  • Epidemiology
  • Mathematical Biology
  • Computational Science

Background:

  • Standard compartmental models like SEIR struggle to accurately represent contact tracing effects.
  • Agent-based models (ABMs) are complex, computationally expensive, and less understood alternatives for evaluating testing and tracing strategies.

Purpose of the Study:

  • To present a novel method for integrating Testing, contact-Tracing, and Isolation (TTI) strategies into compartmental epidemic models.
  • To develop a computationally efficient model that accurately approximates agent-based model behavior for outbreak management.

Main Methods:

  • Derivation of a new SEIR-TTI model using probabilistic arguments to link individual-level contact tracing to population-level dynamics.
  • Comparison of the SEIR-TTI model's accuracy and computational cost against mechanistic agent-based models.

Main Results:

  • The developed SEIR-TTI model accurately approximates the behavior of agent-based models.
  • The SEIR-TTI model offers significantly reduced computational cost compared to ABMs.
  • The model is suitable for exploratory analysis to determine optimal testing and tracing levels.

Conclusions:

  • The SEIR-TTI model provides an accurate and computationally efficient approach for incorporating TTI strategies into epidemic modeling.
  • This method facilitates adaptive planning for disease outbreak management by quantifying intervention requirements.
  • The model enhances the evaluation of public health strategies for epidemic containment.