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Published on: November 30, 2022
ATAD3B is a mitophagy receptor mediating clearance of oxidative stress-induced damaged mitochondrial DNA
1Hubei Key Laboratory of Cell Homeostasis, College of Life Sciences, Frontier Science Center for Immunology and Metabolism, Wuhan University, Wuhan, China.
Abstract:
Mitochondrial DNA (mtDNA) encodes several key components of respiratory chain complexes that produce cellular energy through oxidative phosphorylation. mtDNA is vulnerable to damage under various physiological stresses, especially oxidative stress. mtDNA damage leads to mitochondrial dysfunction, and dysfunctional mitochondria can be removed by mitophagy, an essential process in cellular homeostasis. However, how damaged mtDNA is selectively cleared from the cell, and how damaged mtDNA triggers mitophagy, remain mostly unknown. Here, we identified a novel mitophagy receptor, ATAD3B, which is specifically expressed in primates. ATAD3B contains a LIR motif that binds to LC3 and promotes oxidative stress-induced mitophagy in a PINK1-independent manner, thus promoting the clearance of damaged mtDNA induced by oxidative stress. Under normal conditions, ATAD3B hetero-oligomerizes with ATAD3A, thus promoting the targeting of the C-terminal region of ATAD3B to the mitochondrial intermembrane space. Oxidative stress-induced mtDNA damage or mtDNA depletion reduces ATAD3B-ATAD3A hetero-oligomerization and leads to exposure of the ATAD3B C-terminus at the mitochondrial outer membrane and subsequent recruitment of LC3 for initiating mitophagy. Furthermore, ATAD3B is little expressed in m.3243A > G mutated cells and MELAS patient fibroblasts showing endogenous oxidative stress, and ATAD3B re-expression promotes the clearance of m.3243A > G mutated mtDNA. Our findings uncover a new pathway to selectively remove damaged mtDNA and reveal that increasing ATAD3B activity is a potential therapeutic approach for mitochondrial diseases.
Insights
Researchers discovered ATAD3B, a novel mitophagy receptor that clears damaged mitochondrial DNA (mtDNA) during oxidative stress. This finding reveals a new pathway for cellular homeostasis and offers potential therapies for mitochondrial diseases.
Area of Science:
- Cellular Biology
- Mitochondrial Biology
- Genetics
Background:
- Mitochondrial DNA (mtDNA) is crucial for cellular energy production via oxidative phosphorylation.
- Oxidative stress can damage mtDNA, leading to mitochondrial dysfunction and impaired cellular homeostasis.
- The mechanisms for selective clearance of damaged mtDNA through mitophagy are largely unknown.
Purpose of the Study:
- To identify novel mitophagy receptors involved in the selective removal of damaged mtDNA.
- To elucidate the mechanism by which damaged mtDNA triggers mitophagy.
- To explore the therapeutic potential of targeting this pathway for mitochondrial diseases.
Main Methods:
- Identification and characterization of the ATAD3B protein as a mitophagy receptor.
- Investigation of ATAD3B's interaction with LC3 and its role in mitophagy.
- Analysis of ATAD3B expression and function in cells with mtDNA mutations (e.g., m.3243A>G) and MELAS patient fibroblasts.
- Assessment of ATAD3B's role in targeting damaged mtDNA for clearance.
Main Results:
- ATAD3B, a primate-specific protein, acts as a mitophagy receptor, promoting the clearance of oxidative stress-induced damaged mtDNA.
- ATAD3B binds to LC3 via a LIR motif, initiating mitophagy independently of PINK1.
- Under oxidative stress, reduced ATAD3B-ATAD3A hetero-oligomerization exposes ATAD3B, facilitating LC3 recruitment and mitophagy.
- ATAD3B re-expression in cells with mtDNA mutations (m.3243A>G) enhances the clearance of mutated mtDNA.
Conclusions:
- ATAD3B is a novel mitophagy receptor that selectively clears damaged mtDNA in response to oxidative stress.
- The ATAD3B-mediated pathway provides a new mechanism for maintaining mitochondrial quality control.
- Enhancing ATAD3B activity presents a potential therapeutic strategy for mitochondrial disorders associated with mtDNA damage.
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