Phospho-regulation and function of ULK1-ATG13 during the cell cycle
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Updated: Nov 15, 2025

Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay
Published on: May 3, 2018
Zhiyuan Li1,2, Xin Zhang1,3
1High Magnetic Field Laboratory, Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, P. R. China.
Abstract:
Although it has been reported that some autophagy-related proteins could regulate the cell cycle, the function of ULK1-ATG13, the only protein kinase complex in macroautophagy/autophagy, remains unclear. We recently found that mitotic ULK1 and ATG13 are both substrates of the key cell cycle regulator CDK1-CCNB/cyclin B. CDK1-induced ULK1-ATG13 phosphorylation promotes mitotic autophagy and cell cycle progression. Moreover, ULK1 and ATG13 double-knockout significantly inhibits cell cycle progression and tumor cell proliferation in vitro and in vivo. These findings bridge the mutual regulation between autophagic and mitotic key kinases and provide a theoretical basis for autophagy- and cell division-related diseases based on combination therapy.
Insights
The ULK1-ATG13 autophagy complex regulates cell cycle progression. CDK1-CCNB/cyclin B phosphorylation of ULK1-ATG13 promotes mitotic autophagy and cell division, impacting tumor growth.
Area of Science:
- Molecular Biology
- Cell Biology
- Cancer Research
Background:
- The interplay between autophagy and the cell cycle is complex, with some autophagy-related proteins known to influence cell division.
- The specific role of the ULK1-ATG13 complex, a core component of macroautophagy, in cell cycle regulation remained largely undefined.
Purpose of the Study:
- To elucidate the function of the ULK1-ATG13 complex in cell cycle regulation.
- To investigate the relationship between ULK1-ATG13 phosphorylation and cell cycle progression.
- To determine the impact of ULK1-ATG13 on tumor cell proliferation.
Main Methods:
- Investigated ULK1 and ATG13 as substrates of CDK1-CCNB/cyclin B.
- Analyzed the effect of CDK1-induced phosphorylation on ULK1-ATG13 activity.
- Performed ULK1 and ATG13 double-knockout experiments in vitro and in vivo.
- Assessed the impact on cell cycle progression and tumor cell proliferation.
Main Results:
- Mitotic ULK1 and ATG13 were identified as substrates of the cell cycle regulator CDK1-CCNB/cyclin B.
- CDK1-induced phosphorylation of ULK1-ATG13 was found to promote both mitotic autophagy and cell cycle progression.
- Simultaneous knockout of ULK1 and ATG13 significantly impaired cell cycle progression and tumor cell proliferation both in vitro and in vivo.
Conclusions:
- Established a link between autophagic kinases (ULK1-ATG13) and mitotic kinases (CDK1-CCNB), revealing mutual regulation.
- Demonstrated that ULK1-ATG13 phosphorylation is crucial for mitotic autophagy and cell cycle advancement.
- Provided a mechanistic basis for targeting autophagy and cell division in combination therapies for related diseases.
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