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Updated: Nov 15, 2025

Visualization of DNA Repair Proteins Interaction by Immunofluorescence
Published on: June 26, 2020
RNF8 ubiquitinates RecQL4 and promotes its dissociation from DNA double strand breaks
Qunsong Tan1,2,3, Kaifeng Niu1,2,3, Yuqi Zhu1,2,3
1Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, 100101, China.
Abstract:
Ubiquitination-dependent DNA damage response (DDR) signals play a critical role in the cellular choice of DNA damage repair pathways. Human DNA helicase RecQL4 participates in DNA replication and repair, and loss of RecQL4 is associated with autosomal recessive genetic disorders characterized by genomic instability features. In an earlier study, RecQL4 was isolated as a stable complex that contained two ubiquitin ligases of the N-end rule (UBR1 and UBR2). However, it is unknown whether or not RecQL4 ubiquitination status is critical for its DNA repair function. Here, we report that RecQL4 directly interacts with RNF8 (a RING finger ubiquitin E3 ligase), and both co-localize at DNA double-strand break (DSB) sites. Our findings indicate that RNF8 ubiquitinates RecQL4 protein mainly at the lysine sites of 876, 1048, and 1101, thereby facilitating the dissociation of RecQL4 from DSB sites. RecQL4 mutant at ubiquitination sites had a significantly prolonged retention at DSBs, which hinders the recruitment of its direct downstream DSB repair proteins (CtIP & Ku80). Interestingly, reduced DSB repair capacity observed in RecQL4 depleted cells was restored only by the reconstitution of wild-type RecQL4, but not the ubiquitination mutant. Additionally, RecQL4 directly interacts with WRAP53β that is known to recruit RNF8 to DSBs and WRAP53β enhances the association of RecQL4 with RNF8. WRAP53β silencing resulted in a nearly diminished recruitment of RNF8 to DSBs and in a greatly attenuated dissociation of RecQL4 from the DSB sites. Collectively, our study demonstrates that the ubiquitination event mediated by RNF8 constitutes an essential component for RecQL4's function in DSB repair.
Insights
Ubiquitination of human DNA helicase RecQL4 by RNF8 is crucial for DNA double-strand break (DSB) repair. This ubiquitination facilitates RecQL4
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- DNA damage response (DDR) pathways guide DNA repair.
- RecQL4 helicase is vital for DNA replication and repair, with loss linked to genomic instability.
- RecQL4's role in DNA repair and its ubiquitination status were previously unclear.
Purpose of the Study:
- To investigate the role of RecQL4 ubiquitination in DNA double-strand break (DSB) repair.
- To elucidate the interaction between RecQL4, RNF8, and WRAP53β in the DDR pathway.
Main Methods:
- Co-immunoprecipitation assays to confirm protein interactions.
- Immunofluorescence microscopy to visualize co-localization at DSB sites.
- Site-directed mutagenesis to identify ubiquitination sites on RecQL4.
- Cell depletion and reconstitution experiments to assess functional impact.
Main Results:
- RecQL4 directly interacts with RNF8 and co-localizes at DSB sites.
- RNF8 ubiquitinates RecQL4 at specific lysine residues (876, 1048, 1101), promoting its dissociation from DSBs.
- RecQL4 ubiquitination mutants show prolonged retention at DSBs, impairing downstream repair protein recruitment (CtIP, Ku80).
- WRAP53β enhances RecQL4-RNF8 interaction and RNF8 recruitment to DSBs.
- Functional RecQL4 is essential for DSB repair capacity, with ubiquitination being a key regulatory step.
Conclusions:
- RNF8-mediated ubiquitination of RecQL4 is essential for efficient DNA double-strand break repair.
- This ubiquitination event regulates RecQL4's dissociation from DSB sites, facilitating subsequent repair steps.
- The WRAP53β-RNF8-RecQL4 axis represents a critical regulatory mechanism in the DDR pathway.
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