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Free Radicals in Chemical Biology: from Chemical Behavior to Biomarker Development
Published on: April 15, 2013
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Activation modes in biocatalytic radical cyclization reactions
Yuxuan Ye1, Haigen Fu1, Todd K Hyster1
1Department of Chemistry, Princeton University, Princeton, NJ 08544, USA.
Journal of Industrial Microbiology & Biotechnology
|March 6, 2021
Summary
This review explores biocatalytic radical cyclization mechanisms, focusing on enzymes like cytochrome P450s and radical SAM enzymes. These natural processes offer opportunities for enhanced synthesis of complex molecules.
Area of Science:
- Biochemistry
- Organic Chemistry
- Enzymology
Background:
- Radical cyclizations are crucial in natural product biosynthesis and chemical synthesis.
- Understanding enzymatic mechanisms is key to developing novel synthetic strategies.
Purpose of the Study:
- To review general mechanisms of biocatalytic radical cyclizations.
- To highlight specific enzyme classes involved in these reactions.
- To explore the potential of enzymes in synthesizing complex molecules via radical pathways.
Main Methods:
- Review of literature on biocatalytic radical cyclizations.
- Focus on specific enzyme families: cytochrome P450 monooxygenases (P450s), nonheme iron- and α-ketoglutarate-dependent dioxygenases (Fe/αKGDs), and radical S-adenosylmethionine (SAM) enzymes.
- Examination of flavin-dependent "ene"-reductases (EREDs) for non-natural reactions.
Main Results:
- Detailed mechanisms of P450s in mycocyclosin and vancomycin biosynthesis.
- Mechanisms of Fe/αKGDs in kainic acid, scopolamine, and isopenicillin N biosynthesis.
- Mechanisms of radical SAM enzymes in oxetanocin A, menaquinone, and F420 biosynthesis.
- Demonstration of EREDs for novel radical cyclizations.
Conclusions:
- Enzymes provide versatile mechanisms for radical cyclizations.
- Natural biocatalytic radical cyclization pathways offer blueprints for synthetic chemistry.
- Enzymes can be leveraged to enhance the synthesis of complex molecules through radical mechanisms.
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