Protein C Promotor Haplotypes Associated with Large-Artery Atherosclerosis Stroke in Iranian Population
Seyed Elyas Meshkani1, Ali Fasihi2, Fatemeh Badakhshan3
1Cellular and Molecular Research Center, Sabzevar University of Medical Sciences, Sabzevar, Iran.
Insights
Genetic variations in Protein C (PC) influence ischemic stroke (IS) risk. Specific single-nucleotide polymorphisms (SNPs) in the PC promoter were found to be more common in Iranian IS patients, suggesting a genetic link.
Area of Science:
- Genetics
- Cardiovascular Science
- Molecular Biology
Background:
- Ischemic stroke (IS) is a complex condition with numerous risk factors, including genetic predispositions.
- Protein C (PC), an essential antithrombotic enzyme, plays a crucial role in regulating blood coagulation.
- Genetic variations in PC can disrupt coagulation pathways, potentially leading to thrombosis and increasing stroke risk.
Purpose of the Study:
- To investigate the association between three single-nucleotide polymorphisms (SNPs) in the core promoter of the Protein C gene and the risk of ischemic stroke in the Iranian population.
- To explore the potential functional impact of these SNPs on PC gene expression and their role in IS pathogenesis.
Main Methods:
- Blood samples were collected from ischemic stroke patients (n=249) and healthy controls (n=203).
- Biochemical analyses were performed, and DNA was extracted for genotyping using the High-Resolution Melting (HRM) technique.
- Bioinformatic analyses were employed to predict the functional consequences of identified SNPs on transcription factor binding and gene expression.
Main Results:
- Significant differences in smoking status, hypertension, LDL cholesterol, and fasting blood glucose were observed between IS patients and controls.
- Two SNPs, rs1799809 and rs1799810, were found to be significantly more prevalent in the IS patient group.
- The CGT haplotype was significantly associated with an increased risk of ischemic stroke (p=0.001).
Conclusions:
- Specific SNPs in the Protein C core promoter are associated with an increased risk of ischemic stroke in the Iranian population.
- These genetic variations may alter transcription factor binding affinity, leading to reduced PC expression and consequently elevating the risk of IS.
- The findings highlight the importance of genetic factors, particularly variations in the PC gene, in the etiology of ischemic stroke.
Abstract:
Ischemic stroke (IS) is a complex disease regarding its risk factors; among those factors, genetics has an important role. Protein C (PC) is an important antithrombotic enzyme which its genetic variations disrupt the normal cascade of blood coagulation, resulting in thrombosis and increases the chance of stroke. Therefore, we aimed to investigate three single-nucleotide polymorphisms (SNPs) located in the core promoter of PC in order to find their role in this condition in the Iranian population. Blood samples from IS patients (n = 249) and healthy volunteers (n = 203) were collected. Biochemical analysis was performed. Genotyping was conducted on the extracted DNA from blood samples via the HRM technique. Bioinformatic investigations were used to assess how these SNPs may be involved in the IS. Smoking, hypertension, low-density lipoprotein cholesterol, and fasting blood glucose were significantly different between healthy and IS groups. rs1799809 and rs1799810 SNPs were significantly more frequent among IS patients. Also, among four identified haplotypes, CGT was found associated with IS (p = 0.001). It was also found that these SNPs may interfere with the binding of transcription factors to alter the expression of PC. Our data predict that SNPs at the core promoter of PC can affect the binding affinity of transcription factors which in turn reduces the expression of PC and increases the risk of IS.
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