An antibiotic-resistance conferring mutation in a neisserial porin: Structure, ion flux, and ampicillin binding
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Updated: Nov 15, 2025

Generating Transposon Insertion Libraries in Gram-Negative Bacteria for High-Throughput Sequencing
Published on: July 7, 2020
Annika Bartsch1, Callum M Ives2, Christof Kattner3
1Institute of Organic and Biomolecular Chemistry, University of Göttingen, Tammannstraße 2, 37077 Göttingen, Germany.
Abstract:
Gram-negative bacteria cause the majority of highly drug-resistant bacterial infections. To cross the outer membrane of the complex Gram-negative cell envelope, antibiotics permeate through porins, trimeric channel proteins that enable the exchange of small polar molecules. Mutations in porins contribute to the development of drug-resistant phenotypes. In this work, we show that a single point mutation in the porin PorB from Neisseria meningitidis, the causative agent of bacterial meningitis, can strongly affect the binding and permeation of beta-lactam antibiotics. Using X-ray crystallography, high-resolution electrophysiology, atomistic biomolecular simulation, and liposome swelling experiments, we demonstrate differences in drug binding affinity, ion selectivity and drug permeability of PorB. Our work further reveals distinct interactions between the transversal electric field in the porin eyelet and the zwitterionic drugs, which manifest themselves under applied electric fields in electrophysiology and are altered by the mutation. These observations may apply more broadly to drug-porin interactions in other channels. Our results improve the molecular understanding of porin-based drug-resistance in Gram-negative bacteria.
Insights
A single mutation in the PorB protein of Neisseria meningitidis significantly impacts beta-lactam antibiotic binding and permeation, revealing key mechanisms of drug resistance in Gram-negative bacteria.
Area of Science:
- Microbiology
- Structural Biology
- Biophysics
Background:
- Gram-negative bacteria are responsible for most highly drug-resistant infections.
- Antibiotics must pass through porin channels in the outer membrane to reach their targets.
- Porin mutations are a known mechanism for developing antibiotic resistance.
Purpose of the Study:
- To investigate how a single point mutation in the Neisseria meningitidis PorB porin affects beta-lactam antibiotic interaction.
- To elucidate the molecular mechanisms underlying porin-mediated antibiotic resistance in Gram-negative bacteria.
Main Methods:
- X-ray crystallography to determine structural changes.
- High-resolution electrophysiology to measure ion and drug flow.
- Atomistic biomolecular simulations to model drug-porin interactions.
- Liposome swelling assays to assess drug permeation.
Main Results:
- A single point mutation in PorB alters drug binding affinity and ion selectivity.
- The mutation affects the permeability of beta-lactam antibiotics through the porin channel.
- Distinct interactions between the porin's electric field and zwitterionic drugs were observed, influenced by the mutation.
Conclusions:
- Porin mutations play a critical role in antibiotic resistance by modulating drug permeation.
- Understanding these drug-porin interactions is crucial for developing new strategies against resistant Gram-negative infections.
- The findings offer insights into broader drug-channel interactions and resistance mechanisms.
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