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Updated: Nov 14, 2025

Quantitative Real-Time PCR Evaluation of microRNA Expressions in Mouse Kidney with Unilateral Ureteral Obstruction
Published on: August 27, 2020
Overexpression of Long Non-coding RNA 4933425B07Rik Causes Urinary Malformations in Mice
Lihong Tan1, Minghui Yu1, Yaxin Li1
1Department of Nephrology, Shanghai Kidney Development and Pediatric Kidney Disease Research Center, Children's Hospital of Fudan University, Shanghai, China.
Abstract:
Congenital anomalies of the kidney and urinary tract (CAKUT) is a common birth defect and is the leading cause of end-stage renal disease in children. The etiology of CAKUT is complex and includes mainly genetic and environmental factors. However, these factors cannot fully explain the etiological mechanism of CAKUT. Recently, participation of long non-coding RNAs (lncRNAs) in the development of the circulatory and nervous systems was demonstrated; however, the role of lncRNAs in the development of the kidney and urinary tract system is unclear. In this study, we used the piggyBac (PB) transposon-based mutagenesis to construct a mouse with lncRNA 4933425B07Rik (Rik) PB insertion (Rik PB/PB) and detected overexpression of Rik and a variety of developmental abnormalities in the urinary system after PB insertion, mainly including renal hypo/dysplasia. The number of ureteric bud (UB) branches in the Rik PB/PB embryonic kidney was significantly decreased in embryonic kidney culture. Only bone morphogenetic protein 4 (Bmp4), a key molecule regulating UB branching, is significantly downregulated in Rik PB/PB embryonic kidney, while the expression levels of other molecules involved in the regulation of UB branching were not significantly different according to the RNA-sequencing (RNA-seq) data, and the results were verified by quantitative real-time polymerase chain reaction (RT-PCR) and immunofluorescence assays. Besides, the expression of pSmad1/5/8, a downstream molecule of BMP4 signaling, decreased by immunofluorescence. These findings suggest that abnormal expression of Rik may cause a reduction in the UB branches by reducing the expression levels of the UB branching-related molecule Bmp4, thus leading to the development of CAKUT.
Insights
Long non-coding RNA 4933425B07Rik (Rik) overexpression in mice causes congenital anomalies of the kidney and urinary tract (CAKUT). This occurs by downregulating bone morphogenetic protein 4 (Bmp4), reducing ureteric bud branching and leading to renal hypo/dysplasia.
Area of Science:
- Developmental Biology
- Genetics
- Molecular Biology
Background:
- Congenital anomalies of the kidney and urinary tract (CAKUT) are common birth defects and a leading cause of pediatric end-stage renal disease.
- The precise etiological mechanisms of CAKUT, beyond genetics and environment, remain incompletely understood.
- Long non-coding RNAs (lncRNAs) are implicated in various developmental processes, but their role in kidney and urinary tract development is largely unexplored.
Purpose of the Study:
- To investigate the role of lncRNA 4933425B07Rik (Rik) in the development of CAKUT.
- To elucidate the molecular mechanisms by which Rik influences kidney and urinary tract development.
Main Methods:
- Utilized piggyBac (PB) transposon-based mutagenesis to generate a mouse model with Rik PB insertion (RikPB/PB).
- Analyzed urinary system development, specifically renal hypo/dysplasia, in RikPB/PB mice.
- Performed embryonic kidney culture to assess ureteric bud (UB) branching.
- Employed RNA-sequencing (RNA-seq), quantitative real-time polymerase chain reaction (RT-PCR), and immunofluorescence assays to evaluate gene and protein expression levels.
Main Results:
- PB insertion led to Rik overexpression and significant urinary system developmental abnormalities, primarily renal hypo/dysplasia, in RikPB/PB mice.
- RikPB/PB embryonic kidneys exhibited significantly reduced ureteric bud branching.
- Bone morphogenetic protein 4 (Bmp4), a key regulator of UB branching, was significantly downregulated in RikPB/PB embryonic kidneys.
- Downregulation of pSmad1/5/8, a downstream signaling molecule of BMP4, was observed via immunofluorescence.
Conclusions:
- Abnormal expression of lncRNA Rik is implicated in the pathogenesis of CAKUT.
- Rik may induce CAKUT by downregulating Bmp4 expression, subsequently impairing ureteric bud branching and leading to renal developmental defects.
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